iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.20e-11	43.0	489	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +Cg+gg+    l+ C  C ++fH aClk +   ++p+ + w+C++C+
   Q: 489  DMCSICGNGGD----LLLCAGCPQAFHTACLKFQ---SMPEGT-WYCSSCN 531
           79*********....*******************...9****6.******8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGEATVCFAK ENSETKKDLK RDRLCFEQDN LDEEELYSSN KRQTKEPSND DMKSEISNPV 60
PSPVVDNASS FRDITSNPAK SSSGDRVGSC SGSYETITDE KHSEYCSSLA NSDAVPSSFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGAAG CAACAGTTTG TTTCGCGAAA GAGAATTCAG AAACGAAGAA GGATTTGAAG 60
AGAGACCGTC TTTGTTTTGA ACAAGATAAT CTAGACGAAG AAGAGCTTTA TTCCTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0012--Acyltransferase
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR032308--Jas
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF16135--Jas
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016746--F:transferase activity, transferring acyl groups
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006057	Arabidopsis lyrata	87.83	0.00e+00	1422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence