iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017824

Ensembl Protein ID

Bra035110.1-P

UniProt Accession

M4F213; M4F213_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035110	Bra035110.1	Bra035110.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.70e-09	36.3	686	734

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C  ++e + +l+ C++C++ fHp+C+ ++  ++lp++  wiC +C++
   Q: 686  QICQICSGEDERK-KLLHCSECDKLFHPDCVVPP-VTDLPSEA-WICYSCKE 734
           79****9888865.7*******************.99999996.******97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTQPPPQPPP PLPAPPHSGP PRGDVQVRCA GCRVILRVKT GVVEFSCPTC QLPQMLPPEL 60
LSRARTQPPP PIQSLPPPPP QQQLKPMNLQ QQQQPQPPRP PVPAHGIDPT KMQLPCANCQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGCAAC CCCCGCCTCA GCCCCCTCCG CCGCTCCCCG CTCCGCCGCA CTCTGGTCCT 60
CCGAGAGGCG ACGTTCAGGT CAGATGCGCG GGATGCCGCG TGATTCTTCG GGTCAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027417--P-loop_NTPase
IPR026937--SBNO_Helicase_C_dom
IPR026741--SNO
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF13871--Helicase_C_4
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:1990841--F:promoter-specific chromatin binding
GO:0008270--F:zinc ion binding
GO:0006334--P:nucleosome assembly
GO:1900036--P:positive regulation of cellular response to heat
GO:0040029--P:regulation of gene expression, epigenetic
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009408--P:response to heat

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006209	Arabidopsis lyrata	88.74	0.00e+00	2269.00
IUUC-Bol-015830	Brassica oleracea	95.78	0.00e+00	2339.00
IUUC-Cel-018258	Caenorhabditis elegans	37.74	1.00e-06	48.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence