iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134855

Ensembl Protein ID

Zm00001d033734_T003

UniProt Accession

A0A1D6L1X4; A0A1D6L1X4_MAIZE

Genbank Protein ID

ONM08511.1; ONM08512.1

Protein Name

Coatomer subunit alpha-1

Genbank Nucleotide ID

CM007647; CM007647

Gene Name

ZEAMMB73_Zm00001d033734

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033734	Zm00001d033734_T003	Zm00001d033734_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-17	63.9	108	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gH + v+c+ f   + +++vs s D++i++WD +
   Q: 108  GHMNNVSCVMFhakQ-DIIVSNSEDKSIRIWDAT 140
           899********9743.9***************65 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MCASFHPKED LVVSASLDQT VRVWDIGALR KKTVSPADDI LRLTQMNTDL FGGVDAVVKY 60
VLEGHDRGVN WASFHPTLPL IVSGADDRQV KLWRMNDTKA WEVDTLRGHM NNVSCVMFHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTCTCCCC CCTCTGCCCT TCTCTCTCCC TCTCTCGCGA GTCCCGAGTC CCGACTCGCA 60
CCTCCAGATC CACCTCCTCC TCCCTCTTCC AGATCCACCA TCTCTTCTCC GTTCCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003385	Anas platyrhynchos	49.49	0.00e+00	1031.00
IUUC-Cme-027222	Cyanidioschyzon merolae	40.98	1.00e-147	517.00
IUUC-Eeu-034874	Erinaceus europaeus	41.83	0.00e+00	655.00
IUUC-Fca-035739	Felis catus	50.50	0.00e+00	1063.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	46.40	0.00e+00	754.00
IUUC-Opr-070952	Ochotona princeps	42.22	0.00e+00	652.00
IUUC-Ome-081668	Oryza meridionalis	85.56	0.00e+00	1760.00
IUUC-Ptt-103978	Puccinia triticina	46.17	0.00e+00	964.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	45.53	3.00e-177	615.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence