iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-125129

Ensembl Protein ID

TRIAE_CS42_6BS_TGACv1_515435_AA1670100.2

UniProt Accession

A0A1D6B1C3; A0A1D6B1C3_WHEAT

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_6BS_TGACv1_515435_AA1670100	TRIAE_CS42_6BS_TGACv1_515435_AA1670100.1	TRIAE_CS42_6BS_TGACv1_515435_AA1670100.1
TRIAE_CS42_6BS_TGACv1_515435_AA1670100	TRIAE_CS42_6BS_TGACv1_515435_AA1670100.2	TRIAE_CS42_6BS_TGACv1_515435_AA1670100.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	37.93	3.00e-50	196.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Triticum aestivum

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAPETSACG AGPALLFPSS SSSSSSARVE AVVVFTICDS FVRRPDQAER VIGTLLGSVL 60
PDGTVHVRNA YVVPHSESAD QVALDIEYHH NMYASHQKVN PKEVLVGWFS TGFGVSGGST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACAAGCAA AGCACCCCCT CCATCCCGAA TCTCAAAGAC AAATAAAACC CTAGCTGACT 60
AAACGAGTGC GAGCCTTCCC CCCAACCCTT CCTCCTCCTC TACCACCGCG CGCCGCCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	89.94	4.00e-148	518.00
IUUC-Aml-001527	Ailuropoda melanoleuca	39.62	1.00e-56	214.00
IUUC-Atr-002686	Amborella trichopoda	70.30	2.00e-101	362.00
IUUC-Apl-003977	Anas platyrhynchos	38.01	7.00e-47	180.00
IUUC-Aca-004335	Anolis carolinensis	39.16	1.00e-57	217.00
IUUC-Aly-005945	Arabidopsis lyrata	71.32	2.00e-108	385.00
IUUC-Ath-007045	Arabidopsis thaliana	69.81	5.00e-106	377.00
IUUC-Acl-008365	Aspergillus clavatus	35.38	2.00e-44	173.00
IUUC-Afl-008742	Aspergillus flavus	35.29	1.00e-41	164.00
IUUC-Afu-009030	Aspergillus fumigatus	35.02	5.00e-44	172.00
IUUC-Ani-009212	Aspergillus nidulans	33.67	7.00e-43	168.00
IUUC-Ang-009712	Aspergillus niger	35.38	2.00e-43	170.00
IUUC-Aor-009885	Aspergillus oryzae	35.29	4.00e-43	169.00
IUUC-Ate-010315	Aspergillus terreus	34.66	1.00e-41	164.00
IUUC-Ame-010801	Astyanax mexicanus	48.19	9.00e-19	87.80
IUUC-Bgr-011982	Blumeria graminis	35.66	3.00e-42	166.00
IUUC-Bta-012804	Bos taurus	39.01	2.00e-57	216.00
IUUC-Bci-013891	Botrytis cinerea	34.64	4.00e-36	145.00
IUUC-Bdi-014328	Brachypodium distachyon	89.62	2.00e-135	475.00
IUUC-Bol-015446	Brassica oleracea	69.92	1.00e-108	386.00
IUUC-Bra-016862	Brassica rapa	69.17	3.00e-107	381.00
IUUC-Cel-018171	Caenorhabditis elegans	27.37	2.00e-25	110.00
IUUC-Cja-019335	Callithrix jacchus	39.62	2.00e-56	213.00
IUUC-Cfa-020138	Canis familiaris	39.25	4.00e-56	212.00
IUUC-Cpo-022109	Cavia porcellus	36.76	8.00e-46	177.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	43.75	7.00e-64	237.00
IUUC-Csa-023994	Chlorocebus sabaeus	39.62	1.00e-56	214.00
IUUC-Cho-024351	Choloepus hoffmanni	30.57	1.00e-32	134.00
IUUC-Cin-025801	Ciona intestinalis	39.02	3.00e-54	205.00
IUUC-Csv-025805	Ciona savignyi	40.15	1.00e-54	207.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	30.94	5.00e-35	142.00
IUUC-Cne-026868	Cryptococcus neoformans	29.30	2.00e-22	100.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.44	1.00e-20	94.40
IUUC-Dre-028085	Danio rerio	38.04	3.00e-56	212.00
IUUC-Dno-030099	Dasypus novemcinctus	39.62	2.00e-56	213.00
IUUC-Dor-030324	Dipodomys ordii	35.47	7.00e-47	181.00
IUUC-Dse-031314	Dothistroma septosporum	35.87	1.00e-44	174.00
IUUC-Dme-031926	Drosophila melanogaster	39.33	1.00e-52	199.00
IUUC-Ete-032569	Echinops telfairi	38.17	3.00e-52	198.00
IUUC-Eca-033502	Equus caballus	37.37	3.00e-52	199.00
IUUC-Eeu-034883	Erinaceus europaeus	31.87	1.00e-24	106.00
IUUC-Fca-035873	Felis catus	39.62	1.00e-56	214.00
IUUC-Fal-036921	Ficedula albicollis	40.68	5.00e-58	218.00
IUUC-Fox-037765	Fusarium oxysporum	31.32	1.00e-29	124.00
IUUC-Fso-038240	Fusarium solani	31.67	3.00e-30	126.00
IUUC-Gmo-038864	Gadus morhua	38.78	2.00e-57	216.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.20	2.00e-29	124.00
IUUC-Gga-040952	Gallus gallus	40.68	5.00e-58	218.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.13	1.00e-62	233.00
IUUC-Gma-043061	Glycine max	73.68	7.00e-105	374.00
IUUC-Ggo-045591	Gorilla gorilla	39.62	1.00e-56	214.00
IUUC-Hsa-046860	Homo sapiens	39.62	1.00e-56	214.00
IUUC-Hvu-047410	Hordeum vulgare	99.33	1.00e-83	301.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	40.00	4.00e-57	215.00
IUUC-Lch-049410	Latimeria chalumnae	37.44	2.00e-34	139.00
IUUC-Lpe-051102	Leersia perrieri	84.62	3.00e-129	455.00
IUUC-Loc-052016	Lepisosteus oculatus	37.64	9.00e-48	184.00
IUUC-Lma-053157	Leptosphaeria maculans	34.71	2.00e-45	176.00
IUUC-Laf-054568	Loxodonta africana	39.62	2.00e-56	213.00
IUUC-Mcc-054613	Macaca mulatta	39.62	1.00e-56	213.00
IUUC-Meu-056832	Macropus eugenii	22.97	2.00e-18	86.30
IUUC-Mor-057104	Magnaporthe oryzae	29.20	6.00e-30	125.00
IUUC-Mtr-058445	Medicago truncatula	73.68	4.00e-122	431.00
IUUC-Mla-059038	Melampsora laricipopulina	30.18	5.00e-32	132.00
IUUC-Mga-059548	Meleagris gallopavo	38.77	2.00e-49	189.00
IUUC-Mvi-060520	Microbotryum violaceum	26.60	2.00e-18	86.70
IUUC-Mdo-062376	Monodelphis domestica	39.25	3.00e-57	215.00
IUUC-Mmu-063254	Mus musculus	40.00	3.00e-57	216.00
IUUC-Mac-065635	Musa acuminata	68.82	5.00e-109	387.00
IUUC-Mpu-066314	Mustela putorius furo	39.62	1.00e-56	214.00
IUUC-Mlu-067512	Myotis lucifugus	39.54	3.00e-56	213.00
IUUC-Nfi-068262	Neosartorya fischeri	35.02	4.00e-44	172.00
IUUC-Ncr-068872	Neurospora crassa	31.21	4.00e-32	132.00
IUUC-Nle-070118	Nomascus leucogenys	39.62	1.00e-56	214.00
IUUC-Opr-071228	Ochotona princeps	38.43	3.00e-49	188.00
IUUC-Ont-072600	Oreochromis niloticus	39.16	8.00e-60	224.00
IUUC-Oan-073584	Ornithorhynchus anatinus	37.55	5.00e-49	187.00
IUUC-Ocu-074542	Oryctolagus cuniculus	39.62	4.00e-57	215.00
IUUC-Oba-075923	Oryza barthii	86.67	6.00e-135	473.00
IUUC-Obr-076313	Oryza brachyantha	86.30	1.00e-131	462.00
IUUC-Ogl-076932	Oryza glaberrima	86.67	6.00e-135	473.00
IUUC-Ogu-078152	Oryza glumaepatula	86.67	6.00e-135	473.00
IUUC-Oin-079528	Oryza indica	86.67	6.00e-135	473.00
IUUC-Olo-080401	Oryza longistaminata	86.67	6.00e-135	473.00
IUUC-Ome-081553	Oryza meridionalis	86.32	1.00e-134	472.00
IUUC-Oni-082090	Oryza nivara	86.67	9.00e-135	473.00
IUUC-Opu-083583	Oryza punctata	85.27	2.00e-130	458.00
IUUC-Oru-084492	Oryza rufipogon	86.67	6.00e-135	473.00
IUUC-Osa-085383	Oryza sativa	86.67	6.00e-135	473.00
IUUC-Ola-086835	Oryzias latipes	39.54	2.00e-59	223.00
IUUC-Olu-087716	Ostreococcus lucimarinus	34.46	3.00e-39	155.00
IUUC-Oga-088886	Otolemur garnettii	39.25	1.00e-56	214.00
IUUC-Oar-090079	Ovis aries	39.01	2.00e-57	216.00
IUUC-Ptr-091457	Pan troglodytes	39.62	1.00e-56	214.00
IUUC-Pan-092317	Papio anubis	35.33	2.00e-32	132.00
IUUC-Psi-093129	Pelodiscus sinensis	37.07	1.00e-50	194.00
IUUC-Pma-094488	Petromyzon marinus	39.72	7.00e-62	231.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.40	2.00e-47	183.00
IUUC-Ppa-095341	Physcomitrella patens	58.27	3.00e-99	355.00
IUUC-Pfo-096286	Poecilia formosa	38.78	3.00e-59	222.00
IUUC-Pab-097765	Pongo abelii	39.62	1.00e-56	214.00
IUUC-Pop-099131	Populus trichocarpa	72.66	6.00e-115	407.00
IUUC-Pca-100524	Procavia capensis	31.42	6.00e-32	131.00
IUUC-Ppe-101934	Prunus persica	74.44	1.00e-123	436.00
IUUC-Pva-102577	Pteropus vampyrus	39.92	1.00e-56	214.00
IUUC-Pgr-103521	Puccinia graminis	29.37	8.00e-31	128.00
IUUC-Ptt-103801	Puccinia triticina	24.32	2.90e+00	27.70
IUUC-Pte-104304	Pyrenophora teres	35.74	1.00e-47	184.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.74	2.00e-47	183.00
IUUC-Rno-105717	Rattus norvegicus	40.00	2.00e-57	216.00
IUUC-Sha-107190	Sarcophilus harrisii	39.46	2.00e-56	213.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	30.80	3.00e-38	152.00
IUUC-Spo-108355	Schizosaccharomyces pombe	32.13	2.00e-38	153.00
IUUC-Smo-109374	Selaginella moellendorffii	60.90	5.00e-103	367.00
IUUC-Sit-110119	Setaria italica	88.30	5.00e-132	464.00
IUUC-Sly-111570	Solanum lycopersicum	73.31	1.00e-102	366.00
IUUC-Stu-112308	Solanum tuberosum	74.06	3.00e-112	398.00
IUUC-Sar-113515	Sorex araneus	37.89	4.00e-15	75.10
IUUC-Sbi-114605	Sorghum bicolor	86.46	6.00e-133	468.00
IUUC-Sre-114906	Sporisorium reilianum	34.59	4.00e-41	162.00
IUUC-Tgu-117087	Taeniopygia guttata	38.33	4.00e-49	188.00
IUUC-Tru-117700	Takifugu rubripes	39.54	4.00e-61	228.00
IUUC-Tni-120470	Tetraodon nigroviridis	38.78	7.00e-59	221.00
IUUC-Tca-121109	Theobroma cacao	74.44	1.00e-106	379.00
IUUC-Tre-122095	Trichoderma reesei	31.29	1.00e-30	127.00
IUUC-Tvi-122580	Trichoderma virens	30.94	7.00e-30	125.00
IUUC-Tur-126658	Triticum urartu	85.66	8.00e-131	459.00
IUUC-Tme-127043	Tuber melanosporum	36.26	1.00e-44	174.00
IUUC-Tbe-127927	Tupaia belangeri	39.62	1.00e-56	214.00
IUUC-Ttr-129231	Tursiops truncatus	39.62	8.00e-57	214.00
IUUC-Uma-129578	Ustilago maydis	35.47	1.00e-40	160.00
IUUC-Vda-129730	Verticillium dahliae	30.80	1.00e-34	140.00
IUUC-Vpa-130677	Vicugna pacos	51.72	6.20e-02	32.30
IUUC-Vvi-130968	Vitis vinifera	73.96	2.00e-113	402.00
IUUC-Xtr-132203	Xenopus tropicalis	38.40	5.00e-54	204.00
IUUC-Xma-133972	Xiphophorus maculatus	38.78	4.00e-59	221.00
IUUC-Yli-134553	Yarrowia lipolytica	32.84	2.00e-33	136.00
IUUC-Zma-134941	Zea mays	86.79	6.00e-121	427.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence