iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015408

Ensembl Protein ID

Bo5g004390.1

UniProt Accession

A0A0D3C7H0; A0A0D3C7H0_BRAOL

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g004390	Bo5g004390.1	Bo5g004390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	7.50e-17	62.8	90	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           v vkvs++g+++++++dl+ + ++++Llka++  +           ++k+s++ ++YeD+dGD++ l +D++++++v        ++rl+i+ 
   Q: 90   VYVKVSMDGAPYLRKIDLSCYKGYKELLKALEImFNfsvgeyfereGYKGSDFVPTYEDKDGDWM-LIGDVPWEMFVC------TCKRLRIMR 175
           78*******************************6237789999999*******************.************......999999985 PP

Organism

Brassica oleracea

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MDEFVNLKAT ELRLGLPGTD NVCEERERVS CNKRTLQGVT ENETESSMMK TGTCPPRKAQ 60
IVGWPPVRSS RKNIIQTKKN ESDSEGGRGV YVKVSMDGAP YLRKIDLSCY KGYKELLKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAGT TTGTTAACCT AAAGGCAACC GAGCTGAGGC TGGGACTACC AGGAACAGAC 60
AATGTATGTG AAGAAAGAGA AAGAGTTTCT TGCAATAAAA GAACATTACA AGGTGTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0044212--F:transcription regulatory region DNA binding
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005805	Arabidopsis lyrata	81.15	4.00e-81	293.00
IUUC-Ath-007370	Arabidopsis thaliana	83.16	3.00e-90	324.00
IUUC-Bra-016684	Brassica rapa	95.16	3.00e-102	363.00
IUUC-Lpe-051475	Leersia perrieri	43.72	3.00e-35	141.00
IUUC-Mla-059044	Melampsora laricipopulina	36.36	4.50e-01	30.40
IUUC-Ncr-068890	Neurospora crassa	35.85	4.30e-01	28.50
IUUC-Oba-075141	Oryza barthii	50.00	1.00e-45	175.00
IUUC-Ogu-078093	Oryza glumaepatula	48.99	1.00e-43	168.00
IUUC-Oin-079780	Oryza indica	50.00	2.00e-43	167.00
IUUC-Oni-083078	Oryza nivara	50.00	2.00e-43	167.00
IUUC-Oru-084991	Oryza rufipogon	50.00	2.00e-43	167.00
IUUC-Osa-085321	Oryza sativa	50.00	2.00e-43	167.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence