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Tag Content
iUUCD ID IUUC-Lch-050517
Ensembl Protein ID ENSLACP00000014409.1
UniProt Accession H3AXN8; H3AXN8_LATCH
Genbank Protein ID ENSLACP00000014409
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01129762
Gene Name kdm5c; LOC102354446
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000012681.1 ENSLACT00000014509.1 ENSLACP00000014409.1
ENSLACG00000012681.1 ENSLACT00000014510.1 ENSLACP00000014410.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 6.80e-11 42.4 354 400
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C++g++d+ +l+ C+ C++++H  Cl ++  +e p+ + w Cp+C 
   Q: 354  VCRICARGDDDD-KLLLCDGCDDNYHIFCLLPP-LPETPKGS-WKCPRCV 400
           8*********88.6*******************.*******8.******6 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MEQDEFILPP ECPVFEPSWD EFQDPLGYIA KIRPIAEKSG ICKIRPPVDW QPPFAVEVDN 60
FRFTPRIQRL NELEAQTRVK LNYLDRIARF WEIQGSSLKI PNVERRILDL YSLSRVVKEE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050517|E3,PHD|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGCAGG ATGAGTTTAT TCTGCCACCT GAGTGTCCAG TTTTTGAACC AAGCTGGGAT 60
GAATTCCAAG ACCCCTTGGG ATACATAGCC AAAATCCGGC CCATTGCAGA GAAATCGGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050517|E3,PHD|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2
SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0043524--P:negative regulation of neuron apoptotic process
KEGG lcm:102354446
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001327 Ailuropoda melanoleuca 73.20 0.00e+00 2007.00
IUUC-Aca-004712 Anolis carolinensis 75.53 0.00e+00 1896.00
IUUC-Acl-008162 Aspergillus clavatus 32.45 3.00e-119 423.00
IUUC-Afl-008625 Aspergillus flavus 31.38 3.00e-115 410.00
IUUC-Afu-008796 Aspergillus fumigatus 32.65 7.00e-118 419.00
IUUC-Ani-009139 Aspergillus nidulans 32.75 5.00e-112 399.00
IUUC-Aor-010155 Aspergillus oryzae 31.38 4.00e-115 410.00
IUUC-Ate-010453 Aspergillus terreus 31.65 2.00e-112 401.00
IUUC-Bgr-012241 Blumeria graminis 30.77 6.00e-116 412.00
IUUC-Bta-013099 Bos taurus 73.99 0.00e+00 2019.00
IUUC-Bci-013992 Botrytis cinerea 35.88 3.00e-109 390.00
IUUC-Cja-018723 Callithrix jacchus 73.35 0.00e+00 1928.00
IUUC-Cfa-020954 Canis familiaris 73.47 0.00e+00 2036.00
IUUC-Cpo-021718 Cavia porcellus 83.85 0.00e+00 1169.00
IUUC-Csa-023946 Chlorocebus sabaeus 75.07 0.00e+00 2048.00
IUUC-Cin-025321 Ciona intestinalis 46.14 0.00e+00 999.00
IUUC-Csv-026185 Ciona savignyi 47.66 0.00e+00 937.00
IUUC-Cgl-026613 Colletotrichum gloeosporioides 30.00 1.00e-113 405.00
IUUC-Cne-026851 Cryptococcus neoformans 33.05 3.00e-104 374.00
IUUC-Dre-028238 Danio rerio 62.90 0.00e+00 1841.00
IUUC-Dno-029435 Dasypus novemcinctus 74.01 0.00e+00 2018.00
IUUC-Dor-030226 Dipodomys ordii 75.66 0.00e+00 1291.00
IUUC-Dse-031479 Dothistroma septosporum 32.86 3.00e-115 410.00
IUUC-Dme-032021 Drosophila melanogaster 45.83 0.00e+00 1090.00
IUUC-Eca-033834 Equus caballus 73.64 0.00e+00 2042.00
IUUC-Eeu-034692 Erinaceus europaeus 71.96 0.00e+00 1543.00
IUUC-Fca-035766 Felis catus 70.66 0.00e+00 1902.00
IUUC-Fox-037694 Fusarium oxysporum 32.41 1.00e-104 375.00
IUUC-Fso-038127 Fusarium solani 31.04 4.00e-118 420.00
IUUC-Gmo-039140 Gadus morhua 63.92 0.00e+00 1746.00
IUUC-Ggr-039929 Gaeumannomyces graminis 35.38 2.00e-106 381.00
IUUC-Gac-041825 Gasterosteus aculeatus 63.54 0.00e+00 1782.00
IUUC-Ggo-045492 Gorilla gorilla 73.92 0.00e+00 2051.00
IUUC-Hsa-046737 Homo sapiens 73.73 0.00e+00 2036.00
IUUC-Itr-048348 Ictidomys tridecemlineatus 73.86 0.00e+00 2078.00
IUUC-Laf-054098 Loxodonta africana 68.56 0.00e+00 1830.00
IUUC-Mcc-055740 Macaca mulatta 73.99 0.00e+00 2053.00
IUUC-Meu-056643 Macropus eugenii 71.97 0.00e+00 1950.00
IUUC-Mor-057198 Magnaporthe oryzae 32.56 1.00e-113 405.00
IUUC-Mpo-057317 Magnaporthe poae 34.29 5.00e-106 379.00
IUUC-Mtr-058113 Medicago truncatula 32.91 4.00e-93 337.00
IUUC-Mmr-061032 Microcebus murinus 73.84 0.00e+00 2031.00
IUUC-Mdo-062754 Monodelphis domestica 68.93 0.00e+00 1862.00
IUUC-Mmu-063943 Mus musculus 73.49 0.00e+00 2059.00
IUUC-Mpu-066800 Mustela putorius furo 73.47 0.00e+00 2026.00
IUUC-Mlu-067109 Myotis lucifugus 73.59 0.00e+00 2031.00
IUUC-Nfi-068430 Neosartorya fischeri 32.71 3.00e-148 520.00
IUUC-Ncr-068763 Neurospora crassa 30.18 6.00e-116 412.00
IUUC-Nle-069569 Nomascus leucogenys 75.83 0.00e+00 2004.00
IUUC-Ont-072274 Oreochromis niloticus 65.07 0.00e+00 1829.00
IUUC-Oan-073160 Ornithorhynchus anatinus 76.25 0.00e+00 2023.00
IUUC-Ocu-074440 Oryctolagus cuniculus 73.38 0.00e+00 2028.00
IUUC-Ola-087059 Oryzias latipes 65.25 0.00e+00 1831.00
IUUC-Oga-088191 Otolemur garnettii 73.66 0.00e+00 2040.00
IUUC-Oar-090027 Ovis aries 73.99 0.00e+00 2017.00
IUUC-Ptr-091415 Pan troglodytes 69.24 0.00e+00 1932.00
IUUC-Pan-091829 Papio anubis 74.14 0.00e+00 2058.00
IUUC-Pma-094137 Petromyzon marinus 51.36 0.00e+00 1337.00
IUUC-Pno-094879 Phaeosphaeria nodorum 31.39 2.00e-119 424.00
IUUC-Pfo-096645 Poecilia formosa 62.53 0.00e+00 1829.00
IUUC-Pab-097582 Pongo abelii 76.04 0.00e+00 1919.00
IUUC-Pca-100446 Procavia capensis 71.54 0.00e+00 1975.00
IUUC-Pva-102553 Pteropus vampyrus 77.75 0.00e+00 1358.00
IUUC-Pgr-103434 Puccinia graminis 35.98 7.00e-31 127.00
IUUC-Pte-104195 Pyrenophora teres 31.38 8.00e-119 422.00
IUUC-Pyt-104566 Pyrenophora triticirepentis 30.99 3.00e-119 423.00
IUUC-Rno-105359 Rattus norvegicus 69.51 0.00e+00 1957.00
IUUC-Sha-106769 Sarcophilus harrisii 76.22 0.00e+00 1863.00
IUUC-Sja-107734 Schizosaccharomyces japonicus 21.67 1.00e-32 135.00
IUUC-Spo-108283 Schizosaccharomyces pombe 22.25 8.00e-46 179.00
IUUC-Ssl-108489 Sclerotinia sclerotiorum 30.93 5.00e-119 423.00
IUUC-Ssc-116354 Sus scrofa 73.73 0.00e+00 2052.00
IUUC-Tru-117667 Takifugu rubripes 59.72 0.00e+00 1641.00
IUUC-Tni-119920 Tetraodon nigroviridis 64.31 0.00e+00 1744.00
IUUC-Tre-122213 Trichoderma reesei 30.16 3.00e-112 400.00
IUUC-Tvi-122263 Trichoderma virens 30.45 3.00e-110 394.00
IUUC-Tme-127087 Tuber melanosporum 35.48 6.00e-119 422.00
IUUC-Tbe-128040 Tupaia belangeri 84.99 0.00e+00 951.00
IUUC-Ttr-128979 Tursiops truncatus 73.66 0.00e+00 2045.00
IUUC-Vda-129733 Verticillium dahliae 33.47 1.00e-98 355.00
IUUC-Vpa-130433 Vicugna pacos 78.64 0.00e+00 1466.00
IUUC-Xtr-132324 Xenopus tropicalis 68.14 0.00e+00 1919.00
IUUC-Xma-134315 Xiphophorus maculatus 64.75 0.00e+00 1837.00
Created Date 25-Jun-2017

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