iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121187

Ensembl Protein ID

EOY11842

UniProt Accession

A0A061F582; A0A061F582_THECC

Genbank Protein ID

EOY11842.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001885

Gene Name

TCM_030513

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_030513	EOY11842	EOY11842

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-06	26.7	317	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d  ++ a+ ++  ++++G+ D+t+++WD+r
   Q: 317  HLDFSFASAWhPNgVTFATGNQDKTCRIWDVR 348
           5555566689*777999*************97 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSHYQEDYAE YMADEYDMED IDDDMDEEFR GRYMSGSDSD LDEYDYMNNK ISDTSAAQAR 60
RGKDIQGIPW DRLSITREKY RQTRLEQYKN YENIPHSGEG SGKDCKITQK GASYYDFRLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTCTCGAG TTCTCGCGAT CCCCCGTCTA ATTATCATCA TAGTATATTT TATTATTTTT 60
ATTATTTATT TATTGTAATA TTACCATATT AATCGAAGGA CAATTGGGAT TTTGTATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	74.46	0.00e+00	667.00
IUUC-Atr-003022	Amborella trichopoda	73.99	0.00e+00	685.00
IUUC-Aly-006558	Arabidopsis lyrata	75.89	0.00e+00	658.00
IUUC-Ath-006618	Arabidopsis thaliana	76.08	0.00e+00	657.00
IUUC-Bdi-014834	Brachypodium distachyon	73.73	0.00e+00	664.00
IUUC-Bol-016279	Brassica oleracea	72.01	0.00e+00	677.00
IUUC-Bra-016810	Brassica rapa	76.08	0.00e+00	689.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	27.49	3.00e-21	94.70
IUUC-Gma-043334	Glycine max	80.49	0.00e+00	708.00
IUUC-Hvu-047631	Hordeum vulgare	65.94	1.00e-170	591.00
IUUC-Lpe-050907	Leersia perrieri	69.08	6.00e-176	609.00
IUUC-Mtr-058694	Medicago truncatula	79.95	0.00e+00	692.00
IUUC-Mac-065126	Musa acuminata	76.01	0.00e+00	682.00
IUUC-Oba-075716	Oryza barthii	73.43	0.00e+00	657.00
IUUC-Obr-076195	Oryza brachyantha	65.94	1.00e-170	592.00
IUUC-Ogl-077272	Oryza glaberrima	72.73	0.00e+00	652.00
IUUC-Ogu-078041	Oryza glumaepatula	72.95	0.00e+00	654.00
IUUC-Oin-079991	Oryza indica	67.55	8.00e-175	605.00
IUUC-Olo-080659	Oryza longistaminata	61.25	6.00e-148	516.00
IUUC-Ome-081872	Oryza meridionalis	65.36	1.00e-164	572.00
IUUC-Oni-082371	Oryza nivara	73.19	0.00e+00	655.00
IUUC-Opu-083680	Oryza punctata	67.48	1.00e-175	608.00
IUUC-Oru-085156	Oryza rufipogon	72.95	0.00e+00	655.00
IUUC-Osa-086197	Oryza sativa	72.95	0.00e+00	655.00
IUUC-Pop-099666	Populus trichocarpa	77.73	0.00e+00	697.00
IUUC-Pte-104305	Pyrenophora teres	27.98	6.00e-44	171.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	28.24	4.00e-44	172.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	32.10	1.00e-44	173.00
IUUC-Smo-109252	Selaginella moellendorffii	59.53	5.00e-155	539.00
IUUC-Sit-110341	Setaria italica	74.35	2.00e-177	613.00
IUUC-Sly-111343	Solanum lycopersicum	80.94	0.00e+00	747.00
IUUC-Stu-112207	Solanum tuberosum	81.39	0.00e+00	728.00
IUUC-Sbi-113791	Sorghum bicolor	71.81	0.00e+00	648.00
IUUC-Tae-122709	Triticum aestivum	68.56	1.00e-172	598.00
IUUC-Tur-126622	Triticum urartu	67.39	0.00e+00	647.00
IUUC-Vvi-131183	Vitis vinifera	79.02	0.00e+00	737.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence