iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006190

Ensembl Protein ID

fgenesh1_pm.C_scaffold_2001953

UniProt Accession

D7KX62; D7KX62_ARALL

Genbank Protein ID

EFH65553.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_316920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_2001953	fgenesh1_pm.C_scaffold_2001953	fgenesh1_pm.C_scaffold_2001953

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.80e-09	36.8	349	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ d   ++ lpC Hvfh dC+ kw       + +++CPlC+
   Q: 349  CCICLTRYGDDvqVRELPCSHVFHVDCVDKW------LKINATCPLCK 390
           ********66534777***************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDVSSIARTS LTDQHPLLMD HHTHNNRDHI VDITMSNGQD SSSIDELTPP HQGEEETVSS 60
STLTAHPAPP QQRPTSSRNA RRTTSTRSPL NSGLWISVEL VVTVAQIVAA IVVMVLAKDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTTT CTTCCATTGC GCGAACAAGC CTAACTGATC AACATCCTTT GTTAATGGAC 60
CACCATACCC ACAATAACCG CGACCACATC GTTGACATTA CAATGAGCAA CGGCCAGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_316920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007004	Arabidopsis thaliana	81.40	5.00e-159	553.00
IUUC-Bol-016575	Brassica oleracea	76.73	1.00e-133	468.00
IUUC-Bra-017338	Brassica rapa	78.47	4.00e-142	497.00
IUUC-Fox-037674	Fusarium oxysporum	43.66	1.00e-10	61.60
IUUC-Gma-043870	Glycine max	55.37	6.00e-134	469.00
IUUC-Mac-065469	Musa acuminata	54.23	3.00e-112	397.00
IUUC-Ogu-078966	Oryza glumaepatula	51.65	1.00e-81	296.00
IUUC-Oin-079535	Oryza indica	51.39	9.00e-82	296.00
IUUC-Olo-080967	Oryza longistaminata	51.90	1.00e-82	300.00
IUUC-Ome-081533	Oryza meridionalis	51.65	4.00e-81	294.00
IUUC-Opu-083311	Oryza punctata	52.08	4.00e-80	291.00
IUUC-Oru-084956	Oryza rufipogon	51.14	1.00e-81	295.00
IUUC-Osa-085907	Oryza sativa	51.39	9.00e-82	296.00
IUUC-Pno-095077	Phaeosphaeria nodorum	46.94	1.00e-10	58.90
IUUC-Ppe-101804	Prunus persica	68.25	1.00e-130	458.00
IUUC-Pte-104334	Pyrenophora teres	38.75	2.00e-11	61.20
IUUC-Sit-109977	Setaria italica	51.30	7.00e-84	303.00
IUUC-Sbi-113895	Sorghum bicolor	51.81	2.00e-84	305.00
IUUC-Tca-121516	Theobroma cacao	59.47	9.00e-141	492.00
IUUC-Tae-124252	Triticum aestivum	51.28	2.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence