iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022375

Ensembl Protein ID

ENSCPOP00000001643.2

UniProt Accession

H0UX43; H0UX43_CAVPO

Genbank Protein ID

ENSCPOP00000001643

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02037831

Gene Name

EED

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000001815.3	ENSCPOT00000001836.2	ENSCPOP00000001643.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-15	56.2	164	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH + ++ l+f   d +ll+s s D+ +++W++ t++l
   Q: 164  GHGNAINELKFhpRDpNLLLSVSKDHALRLWNIQTDTL 201
           899*********9888****************999876 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSEREVSTAP AGTDMPAAKK QKLSSDENSN PDLSGDENDD AVSIESGTNT ERPDTPTNTP 60
NAPGRKSWGK GKWKSKKCKY SFKCVNSLKE DHNQPLFGVQ FNWHSKEGDP LVFATVGSAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGAGA GGGAAGTGTC CACAGCGCCG GCGGGAACAG ACATGCCTGC GGCCAAGAAG 60
CAGAAGCTGA GCAGCGACGA GAACAGCAAC CCAGACCTCT CTGGAGACGA GAATGTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0045120--C:pronucleus
GO:0001739--C:sex chromatin
GO:0003682--F:chromatin binding
GO:0042054--F:histone methyltransferase activity
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0061087--P:positive regulation of histone H3-K27 methylation
GO:2000011--P:regulation of adaxial/abaxial pattern formation
GO:0006349--P:regulation of gene expression by genetic imprinting

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	38.20	2.00e-64	239.00
IUUC-Aml-001510	Ailuropoda melanoleuca	93.68	0.00e+00	799.00
IUUC-Atr-002496	Amborella trichopoda	36.68	1.00e-56	213.00
IUUC-Apl-003768	Anas platyrhynchos	90.66	0.00e+00	764.00
IUUC-Aca-004382	Anolis carolinensis	92.45	0.00e+00	758.00
IUUC-Aly-005980	Arabidopsis lyrata	37.09	2.00e-64	239.00
IUUC-Ath-006579	Arabidopsis thaliana	37.09	2.00e-64	239.00
IUUC-Ame-010987	Astyanax mexicanus	87.30	0.00e+00	739.00
IUUC-Bta-013432	Bos taurus	94.10	0.00e+00	809.00
IUUC-Bci-013970	Botrytis cinerea	37.31	1.00e-26	114.00
IUUC-Bdi-014553	Brachypodium distachyon	39.50	3.00e-66	245.00
IUUC-Bol-016522	Brassica oleracea	36.64	8.00e-64	237.00
IUUC-Bra-017137	Brassica rapa	36.64	6.00e-64	237.00
IUUC-Cel-018494	Caenorhabditis elegans	23.67	6.00e-28	118.00
IUUC-Cja-019066	Callithrix jacchus	94.33	0.00e+00	812.00
IUUC-Cfa-021261	Canis familiaris	94.33	0.00e+00	811.00
IUUC-Csa-024005	Chlorocebus sabaeus	94.33	0.00e+00	811.00
IUUC-Cho-024881	Choloepus hoffmanni	79.26	5.00e-139	487.00
IUUC-Cin-025697	Ciona intestinalis	57.42	7.00e-129	453.00
IUUC-Csv-026221	Ciona savignyi	59.38	1.00e-131	462.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	27.70	1.00e-22	101.00
IUUC-Cne-026877	Cryptococcus neoformans	32.56	1.00e-27	118.00
IUUC-Cme-027353	Cyanidioschyzon merolae	44.83	4.00e-33	135.00
IUUC-Dre-028346	Danio rerio	85.61	0.00e+00	719.00
IUUC-Dno-029319	Dasypus novemcinctus	93.65	0.00e+00	803.00
IUUC-Dor-030746	Dipodomys ordii	66.31	2.00e-167	581.00
IUUC-Dse-031324	Dothistroma septosporum	27.82	8.00e-24	105.00
IUUC-Dme-032029	Drosophila melanogaster	56.71	2.00e-126	445.00
IUUC-Ete-032880	Echinops telfairi	72.76	3.00e-114	404.00
IUUC-Eca-034272	Equus caballus	93.80	0.00e+00	735.00
IUUC-Eeu-035303	Erinaceus europaeus	87.34	0.00e+00	771.00
IUUC-Fca-036008	Felis catus	94.15	0.00e+00	783.00
IUUC-Fal-037577	Ficedula albicollis	91.81	0.00e+00	719.00
IUUC-Fso-038294	Fusarium solani	25.72	8.00e-26	111.00
IUUC-Gmo-039008	Gadus morhua	83.89	0.00e+00	696.00
IUUC-Ggr-039894	Gaeumannomyces graminis	32.47	3.00e-23	103.00
IUUC-Gga-040859	Gallus gallus	92.45	0.00e+00	756.00
IUUC-Gac-041667	Gasterosteus aculeatus	82.13	0.00e+00	692.00
IUUC-Gma-043832	Glycine max	35.79	6.00e-62	231.00
IUUC-Ggo-045624	Gorilla gorilla	89.27	0.00e+00	798.00
IUUC-Hsa-046505	Homo sapiens	94.33	0.00e+00	811.00
IUUC-Hvu-047228	Hordeum vulgare	37.77	6.00e-33	133.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	94.10	0.00e+00	810.00
IUUC-Lch-050492	Latimeria chalumnae	90.53	0.00e+00	757.00
IUUC-Lpe-050807	Leersia perrieri	39.40	1.00e-63	236.00
IUUC-Loc-052361	Lepisosteus oculatus	87.13	0.00e+00	742.00
IUUC-Lma-053058	Leptosphaeria maculans	28.62	2.00e-19	90.50
IUUC-Laf-053941	Loxodonta africana	86.85	0.00e+00	761.00
IUUC-Mcc-055518	Macaca mulatta	89.27	0.00e+00	798.00
IUUC-Mor-056944	Magnaporthe oryzae	28.42	6.00e-25	108.00
IUUC-Mtr-058716	Medicago truncatula	38.25	8.00e-59	220.00
IUUC-Mga-059469	Meleagris gallopavo	92.45	0.00e+00	757.00
IUUC-Mmr-061026	Microcebus murinus	89.06	0.00e+00	796.00
IUUC-Mdo-062346	Monodelphis domestica	92.52	0.00e+00	796.00
IUUC-Mmu-063785	Mus musculus	94.33	0.00e+00	811.00
IUUC-Mac-064681	Musa acuminata	37.50	3.00e-67	248.00
IUUC-Mpu-066862	Mustela putorius furo	94.33	0.00e+00	811.00
IUUC-Mlu-067103	Myotis lucifugus	86.85	0.00e+00	669.00
IUUC-Ncr-068782	Neurospora crassa	32.98	3.00e-24	106.00
IUUC-Nle-069472	Nomascus leucogenys	94.33	0.00e+00	811.00
IUUC-Opr-070376	Ochotona princeps	96.94	6.00e-126	444.00
IUUC-Ont-071513	Oreochromis niloticus	86.17	0.00e+00	753.00
IUUC-Oan-073202	Ornithorhynchus anatinus	92.56	0.00e+00	725.00
IUUC-Ocu-074012	Oryctolagus cuniculus	94.10	0.00e+00	810.00
IUUC-Oba-075030	Oryza barthii	39.24	2.00e-68	252.00
IUUC-Obr-076895	Oryza brachyantha	38.50	2.00e-67	249.00
IUUC-Ogl-077522	Oryza glaberrima	39.44	1.00e-67	250.00
IUUC-Ogu-078250	Oryza glumaepatula	40.27	2.00e-59	223.00
IUUC-Oin-079886	Oryza indica	38.96	9.00e-68	250.00
IUUC-Olo-080238	Oryza longistaminata	39.24	2.00e-68	252.00
IUUC-Ome-081204	Oryza meridionalis	40.07	2.00e-58	219.00
IUUC-Oni-082388	Oryza nivara	35.34	1.00e-58	220.00
IUUC-Opu-083537	Oryza punctata	38.61	9.00e-68	250.00
IUUC-Oru-084863	Oryza rufipogon	40.33	3.00e-60	225.00
IUUC-Osa-085622	Oryza sativa	39.19	1.00e-68	253.00
IUUC-Ola-087426	Oryzias latipes	83.98	0.00e+00	739.00
IUUC-Olu-087788	Ostreococcus lucimarinus	29.13	4.00e-38	152.00
IUUC-Oga-088228	Otolemur garnettii	93.88	0.00e+00	808.00
IUUC-Oar-090139	Ovis aries	93.55	0.00e+00	733.00
IUUC-Pan-092874	Papio anubis	100.00	6.00e-159	552.00
IUUC-Psi-093927	Pelodiscus sinensis	92.31	0.00e+00	724.00
IUUC-Pma-094740	Petromyzon marinus	77.56	7.00e-120	423.00
IUUC-Pno-095072	Phaeosphaeria nodorum	28.32	2.00e-20	93.60
IUUC-Ppa-095871	Physcomitrella patens	40.00	4.00e-62	231.00
IUUC-Pfo-097208	Poecilia formosa	86.90	0.00e+00	756.00
IUUC-Pab-097658	Pongo abelii	94.33	0.00e+00	811.00
IUUC-Pop-098930	Populus trichocarpa	37.23	6.00e-65	241.00
IUUC-Ppe-101807	Prunus persica	36.86	4.00e-63	234.00
IUUC-Pva-103191	Pteropus vampyrus	78.84	0.00e+00	704.00
IUUC-Pgr-103619	Puccinia graminis	26.91	1.00e-18	87.40
IUUC-Pte-104406	Pyrenophora teres	30.69	7.00e-27	115.00
IUUC-Pyt-104821	Pyrenophora triticirepentis	27.84	6.00e-22	98.60
IUUC-Rno-105854	Rattus norvegicus	94.33	0.00e+00	811.00
IUUC-Sha-107426	Sarcophilus harrisii	92.06	0.00e+00	793.00
IUUC-Smo-109638	Selaginella moellendorffii	36.84	7.00e-63	234.00
IUUC-Sit-110481	Setaria italica	38.20	1.00e-66	246.00
IUUC-Sly-111464	Solanum lycopersicum	36.07	2.00e-62	232.00
IUUC-Stu-112910	Solanum tuberosum	36.07	3.00e-62	232.00
IUUC-Sar-113754	Sorex araneus	91.36	6.00e-177	612.00
IUUC-Sbi-114023	Sorghum bicolor	38.76	1.00e-67	250.00
IUUC-Ssc-115386	Sus scrofa	94.33	0.00e+00	811.00
IUUC-Tgu-117123	Taeniopygia guttata	91.61	0.00e+00	758.00
IUUC-Tru-117720	Takifugu rubripes	82.64	0.00e+00	736.00
IUUC-Tsy-119584	Tarsius syrichta	89.27	0.00e+00	797.00
IUUC-Tni-119695	Tetraodon nigroviridis	85.55	0.00e+00	755.00
IUUC-Tca-121787	Theobroma cacao	37.50	1.00e-64	240.00
IUUC-Tvi-122409	Trichoderma virens	25.71	8.00e-22	98.60
IUUC-Tae-124579	Triticum aestivum	38.20	2.00e-64	239.00
IUUC-Tme-126906	Tuber melanosporum	28.44	6.00e-30	125.00
IUUC-Tbe-127557	Tupaia belangeri	74.68	0.00e+00	671.00
IUUC-Vda-129774	Verticillium dahliae	26.06	9.00e-21	94.70
IUUC-Vpa-130256	Vicugna pacos	79.91	0.00e+00	652.00
IUUC-Vvi-131201	Vitis vinifera	37.77	1.00e-63	236.00
IUUC-Xtr-132206	Xenopus tropicalis	88.56	0.00e+00	754.00
IUUC-Xma-134102	Xiphophorus maculatus	86.90	0.00e+00	756.00
IUUC-Zma-135593	Zea mays	38.76	1.00e-67	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence