iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076266

Ensembl Protein ID

OB03G13430.1

UniProt Accession

J3LJW7; J3LJW7_ORYBR

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G13430	OB03G13430.1	OB03G13430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-09	37.8	191	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkC 51
           ++C +C + + +e  +v C++  C+ ewfH++C++l+   e+p+ + w+Cp+C
   Q: 191  TYC-LCNQVSYGE--MVACDNndCKiEWFHFGCVGLK---EQPKGK-WYCPSC 236
           69*.*******99..*****999**************...999997.****** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGFLEDFQAS VEALPAMLHR NYSLMRELDR SLQGVQTENE QRCQQEIEDI KHGLESGSIA 60
FDPAKLKFSD EAIDEQKHCV RIADEKVALA TQTYDLVDAH IQQLDQFMRK LEELRQEKEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTGCAAAG GGGATCTCTA GCCTGGTCTC GTTTTAACCG CAACCCAACC TGACGTGCCG 60
GCCGGCGAGG CTTTTCAGCG GCCGCTCCGC CGTGTCGCCG TCCGCTCTCC ACCCAGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

obr:102699757

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	34.26	1.00e-36	145.00
IUUC-Atr-002906	Amborella trichopoda	49.60	5.00e-67	246.00
IUUC-Apl-004097	Anas platyrhynchos	34.57	2.00e-36	144.00
IUUC-Aca-004593	Anolis carolinensis	34.66	5.00e-38	150.00
IUUC-Aly-005815	Arabidopsis lyrata	83.82	2.00e-35	140.00
IUUC-Ath-006765	Arabidopsis thaliana	82.35	1.00e-34	138.00
IUUC-Acl-008091	Aspergillus clavatus	56.25	1.00e-18	87.00
IUUC-Ate-010297	Aspergillus terreus	56.25	1.00e-18	87.80
IUUC-Ame-011133	Astyanax mexicanus	36.26	6.00e-40	156.00
IUUC-Bta-012699	Bos taurus	34.40	6.00e-38	149.00
IUUC-Bdi-014504	Brachypodium distachyon	78.23	2.00e-102	363.00
IUUC-Bol-015245	Brassica oleracea	51.94	2.00e-61	228.00
IUUC-Bra-017027	Brassica rapa	52.33	2.00e-61	227.00
IUUC-Cja-019988	Callithrix jacchus	34.66	1.00e-35	142.00
IUUC-Cfa-021282	Canis familiaris	34.66	1.00e-35	142.00
IUUC-Cpo-022085	Cavia porcellus	35.60	4.00e-37	147.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	37.71	1.00e-25	108.00
IUUC-Csa-023203	Chlorocebus sabaeus	34.66	1.00e-35	142.00
IUUC-Cho-024577	Choloepus hoffmanni	77.19	4.00e-28	116.00
IUUC-Cin-025479	Ciona intestinalis	37.23	2.00e-38	151.00
IUUC-Cne-027005	Cryptococcus neoformans	43.55	9.00e-13	67.00
IUUC-Dre-027430	Danio rerio	37.76	7.00e-43	166.00
IUUC-Dno-029766	Dasypus novemcinctus	34.27	5.00e-34	136.00
IUUC-Dor-030315	Dipodomys ordii	73.77	1.00e-27	115.00
IUUC-Dse-031323	Dothistroma septosporum	57.41	2.00e-17	83.60
IUUC-Dme-032200	Drosophila melanogaster	67.16	5.00e-28	117.00
IUUC-Ete-032510	Echinops telfairi	60.00	4.00e-27	114.00
IUUC-Eca-033565	Equus caballus	35.46	4.00e-38	150.00
IUUC-Eeu-034948	Erinaceus europaeus	33.60	1.00e-34	139.00
IUUC-Fca-036368	Felis catus	34.66	1.00e-35	142.00
IUUC-Fal-036998	Ficedula albicollis	35.95	7.00e-38	149.00
IUUC-Fox-037925	Fusarium oxysporum	62.96	3.00e-18	85.50
IUUC-Gmo-038982	Gadus morhua	36.12	2.00e-39	154.00
IUUC-Gga-040578	Gallus gallus	36.29	1.00e-38	152.00
IUUC-Gac-042184	Gasterosteus aculeatus	35.88	2.00e-39	154.00
IUUC-Gma-044339	Glycine max	52.03	3.00e-70	256.00
IUUC-Ggo-045559	Gorilla gorilla	34.66	1.00e-35	142.00
IUUC-Hsa-046852	Homo sapiens	34.66	1.00e-35	142.00
IUUC-Hvu-047046	Hordeum vulgare	72.83	8.00e-92	328.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	35.06	7.00e-38	149.00
IUUC-Kpa-049229	Komagataella pastoris	58.33	6.00e-15	73.20
IUUC-Lch-050397	Latimeria chalumnae	33.09	4.00e-32	130.00
IUUC-Lpe-050822	Leersia perrieri	91.46	1.00e-111	394.00
IUUC-Loc-052725	Lepisosteus oculatus	36.78	4.00e-38	150.00
IUUC-Lma-053234	Leptosphaeria maculans	51.79	6.00e-16	78.60
IUUC-Laf-054057	Loxodonta africana	34.66	1.00e-35	142.00
IUUC-Mcc-055212	Macaca mulatta	35.18	3.00e-35	140.00
IUUC-Meu-056511	Macropus eugenii	35.29	7.00e-33	132.00
IUUC-Mtr-058089	Medicago truncatula	55.06	1.00e-68	251.00
IUUC-Mga-059967	Meleagris gallopavo	34.84	6.00e-37	146.00
IUUC-Mmr-060843	Microcebus murinus	34.54	8.00e-37	145.00
IUUC-Mdo-062282	Monodelphis domestica	35.86	8.00e-37	145.00
IUUC-Mmu-063201	Mus musculus	36.40	1.00e-37	149.00
IUUC-Mac-064625	Musa acuminata	64.23	1.00e-82	298.00
IUUC-Mpu-066302	Mustela putorius furo	35.08	2.00e-36	144.00
IUUC-Mlu-068192	Myotis lucifugus	34.54	9.00e-37	145.00
IUUC-Nle-069062	Nomascus leucogenys	34.66	1.00e-35	142.00
IUUC-Opr-070207	Ochotona princeps	34.43	6.00e-36	142.00
IUUC-Ont-072446	Oreochromis niloticus	35.42	4.00e-38	150.00
IUUC-Oan-073652	Ornithorhynchus anatinus	35.51	4.00e-36	143.00
IUUC-Ocu-074235	Oryctolagus cuniculus	34.66	1.00e-35	142.00
IUUC-Ogl-077118	Oryza glaberrima	88.67	4.00e-109	386.00
IUUC-Oin-079049	Oryza indica	89.02	3.00e-109	386.00
IUUC-Ome-081291	Oryza meridionalis	86.96	2.00e-109	387.00
IUUC-Oni-082218	Oryza nivara	89.02	3.00e-109	386.00
IUUC-Opu-084171	Oryza punctata	86.36	1.00e-105	375.00
IUUC-Osa-085563	Oryza sativa	86.96	2.00e-109	387.00
IUUC-Ola-087103	Oryzias latipes	37.25	1.00e-36	145.00
IUUC-Oga-089123	Otolemur garnettii	34.66	1.00e-35	142.00
IUUC-Oar-089524	Ovis aries	34.40	6.00e-38	149.00
IUUC-Ptr-090908	Pan troglodytes	33.86	2.00e-35	141.00
IUUC-Pan-092837	Papio anubis	34.26	8.00e-37	145.00
IUUC-Psi-093828	Pelodiscus sinensis	34.58	1.00e-35	141.00
IUUC-Pma-094144	Petromyzon marinus	68.18	1.00e-26	110.00
IUUC-Pfo-096617	Poecilia formosa	35.52	3.00e-39	154.00
IUUC-Pab-097978	Pongo abelii	34.43	1.00e-31	128.00
IUUC-Pop-099415	Populus trichocarpa	52.65	3.00e-67	247.00
IUUC-Pca-100475	Procavia capensis	31.52	3.00e-28	117.00
IUUC-Ppe-101441	Prunus persica	51.63	2.00e-70	257.00
IUUC-Pva-102325	Pteropus vampyrus	35.46	4.00e-38	150.00
IUUC-Pte-104284	Pyrenophora teres	50.00	1.00e-15	77.80
IUUC-Pyt-104787	Pyrenophora triticirepentis	51.79	9.00e-16	78.20
IUUC-Rno-105178	Rattus norvegicus	35.22	8.00e-40	155.00
IUUC-Sha-106773	Sarcophilus harrisii	35.86	1.00e-37	149.00
IUUC-Smo-109441	Selaginella moellendorffii	41.39	8.00e-50	189.00
IUUC-Sit-109827	Setaria italica	79.67	1.00e-101	361.00
IUUC-Sly-111750	Solanum lycopersicum	55.47	3.00e-74	270.00
IUUC-Stu-112250	Solanum tuberosum	55.47	3.00e-74	270.00
IUUC-Sar-113193	Sorex araneus	72.13	2.00e-27	115.00
IUUC-Sbi-114826	Sorghum bicolor	77.64	6.00e-104	369.00
IUUC-Sre-115124	Sporisorium reilianum	65.45	4.00e-22	99.00
IUUC-Ssc-115797	Sus scrofa	34.85	7.00e-36	142.00
IUUC-Tgu-117270	Taeniopygia guttata	34.66	5.00e-38	150.00
IUUC-Tru-118253	Takifugu rubripes	35.25	9.00e-40	155.00
IUUC-Tsy-119035	Tarsius syrichta	60.00	2.00e-27	115.00
IUUC-Tni-120024	Tetraodon nigroviridis	35.80	8.00e-35	139.00
IUUC-Tca-121597	Theobroma cacao	52.03	3.00e-71	259.00
IUUC-Tre-121950	Trichoderma reesei	55.22	8.00e-19	88.20
IUUC-Tvi-122341	Trichoderma virens	60.71	1.00e-15	74.70
IUUC-Tae-123043	Triticum aestivum	71.81	5.00e-93	332.00
IUUC-Tbe-127558	Tupaia belangeri	34.26	1.00e-36	145.00
IUUC-Ttr-128672	Tursiops truncatus	73.77	5.00e-28	117.00
IUUC-Uma-129581	Ustilago maydis	65.45	2.00e-22	100.00
IUUC-Vpa-130063	Vicugna pacos	66.67	8.00e-26	109.00
IUUC-Vvi-131487	Vitis vinifera	54.39	3.00e-71	259.00
IUUC-Xtr-132189	Xenopus tropicalis	36.10	6.00e-36	142.00
IUUC-Xma-133297	Xiphophorus maculatus	35.54	2.00e-37	147.00
IUUC-Yli-134326	Yarrowia lipolytica	59.68	1.00e-19	89.40
IUUC-Zma-135298	Zea mays	75.40	4.00e-91	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence