iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042486	EOY17752	EOY17752
TCM_042486	EOY17753	EOY17753
TCM_042486	EOY17755	EOY17755
TCM_042486	EOY17751	EOY17751
TCM_042486	EOY17754	EOY17754

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-11	43.2	88	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlr 31
           l+f ++ ++lvs s+ + i+vWDl 
   Q: 88   LEFlQNqGFLVSVSNENEIQVWDLE 112
           67885669***************85 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MFTKFFDNHG ASPQSPKSDV AKGSLTSADL NPRVTVHYGI PATASVLACD LIQRLVAVGT 60
LDGRIKVIGG ENIEALLVSP KQLPIKNLEF LQNQGFLVSV SNENEIQVWD LEQRQIASHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTTTTTCA AAATTTTTTA TGATATGTTA GTTGAATATA TGTGTTTTAA TATAATTACG 60
AAAATAATAC AAATTAATGA ACTTATACAC ATTTAAATAA ATACTTATTT CACCTGTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001388--Synaptobrevin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50892--V_SNARE
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005770	Arabidopsis lyrata	52.26	0.00e+00	1059.00
IUUC-Ath-007643	Arabidopsis thaliana	52.63	0.00e+00	1052.00
IUUC-Afl-008612	Aspergillus flavus	22.67	1.00e-11	64.70
IUUC-Ame-010663	Astyanax mexicanus	23.30	7.00e-20	92.40
IUUC-Bci-013698	Botrytis cinerea	22.07	1.00e-11	64.70
IUUC-Bol-015788	Brassica oleracea	52.87	0.00e+00	1050.00
IUUC-Bra-017845	Brassica rapa	53.38	0.00e+00	1072.00
IUUC-Cin-025731	Ciona intestinalis	25.28	6.00e-21	93.60
IUUC-Dor-031024	Dipodomys ordii	22.82	7.00e-19	89.00
IUUC-Gac-041699	Gasterosteus aculeatus	23.15	2.00e-20	94.40
IUUC-Gma-043398	Glycine max	51.82	0.00e+00	1010.00
IUUC-Itr-048031	Ictidomys tridecemlineatus	22.22	1.00e-09	58.20
IUUC-Loc-052677	Lepisosteus oculatus	22.57	7.00e-20	92.80
IUUC-Mtr-058362	Medicago truncatula	51.05	0.00e+00	1014.00
IUUC-Mga-060026	Meleagris gallopavo	23.68	3.00e-14	73.60
IUUC-Opr-070681	Ochotona princeps	21.96	2.00e-11	64.30
IUUC-Ont-072051	Oreochromis niloticus	22.47	2.00e-21	97.40
IUUC-Ola-086437	Oryzias latipes	20.45	6.00e-10	59.30
IUUC-Pno-095147	Phaeosphaeria nodorum	22.56	2.00e-10	60.80
IUUC-Pfo-096618	Poecilia formosa	23.23	8.00e-21	95.50
IUUC-Pop-099413	Populus trichocarpa	58.52	0.00e+00	1235.00
IUUC-Ppe-101236	Prunus persica	58.88	0.00e+00	1250.00
IUUC-Pte-104412	Pyrenophora teres	22.29	1.00e-11	64.70
IUUC-Sly-111338	Solanum lycopersicum	59.26	2.00e-113	401.00
IUUC-Stu-112417	Solanum tuberosum	59.12	2.00e-110	392.00
IUUC-Sre-115050	Sporisorium reilianum	22.37	4.00e-06	47.00
IUUC-Tru-118038	Takifugu rubripes	23.61	5.00e-21	96.30
IUUC-Tni-120014	Tetraodon nigroviridis	23.61	2.00e-20	94.40
IUUC-Uma-129388	Ustilago maydis	22.03	4.00e-06	47.40
IUUC-Vvi-131567	Vitis vinifera	59.55	0.00e+00	1275.00
IUUC-Xtr-132060	Xenopus tropicalis	22.22	3.00e-17	83.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence