iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099805

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_802499; POPTR_0006s28190g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s28190	POPTR_0006s28190.1	POPTR_0006s28190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.40e-77	259.9	182	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           Gl+Nlg tC+mNS+LQ+L++ p++r+++l+  +++e++++  +++++ +l++ +  +f+++++++++ +sp ++l + ++ + ++ +yeqq
   Q: 182  GLNNLGSTCFMNSILQALLHAPPFRNYFLSerHDRETCRK--RSSDQSCLACDIGVIFSAVYSGDRTPYSPAQFLYSWWQHSANLASYEQQ 270
           9*****************************7555566655..589********************************************** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           Da+Ef+  +ld+++e                     ++ +++k++   +++ +++F g l+s+++c +c+ +s++++p +d+sl+   ++ 
   Q: 271  DAHEFFISVLDGIHEREG------------------KERNPNKDNGDCQCIAHRVFSGMLRSDLTCTTCGFTSTTYDPCVDISLNMDTSSF 343
           ***************992..................2346778899999**************************************9997 PP
   S: 182  tkke...............slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpl 257
           ++                 +l  cL+ ft++e+l +++k+yc++c++k+++ k++++k+lP vL+lh+kRf+ s+ +  ++ki+ +++fp 
   Q: 344  SSVDvanksvrpnedtgssTLLACLDLFTRPERLGSDQKLYCQNCQEKRDSLKQMSIKRLPLVLSLHIKRFEHSSLRRTSRKIDWHLQFPF 434
           76669999999999****9************************************************************************ PP
   S: 258  eLdlspfcts..............peekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevke 319
           +Ld++p+++               ++++ + + ++e++avv HsG l+sGHYv+y +  +++W+++dD  +tev+e
   Q: 435  SLDMTPYLSPsivrnrfgnrifgfESDEADISAEFEIFAVVTHSGMLDSGHYVTYLRL-QNQWYKCDDAWITEVDE 509
           *********9888888888888875555555***************************.999************87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDKSSVFANP KPCKHLTDYK LRHGLSGYKF LQKWLKTFPN GKTSIKMCET KMPKCSFCSG 60
IRQGRLFLCL ICSSMSCSDH TLLHSQSENG HDIAVDIERS ELYCCSCSDQ VYDLDFDKVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAAGT AGTGTCTGCT CCATCATTGA CCCACTTTCT TGATTGTCTT GATCAACAAA 60
ATGAACGGTT CATATTCCTC CAAAAGAGCC AAGACAACCT TTTCTTTCGT AAAGAAATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s28190g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008464	Aspergillus flavus	31.33	3.00e-49	188.00
IUUC-Ate-010382	Aspergillus terreus	30.92	3.00e-49	188.00
IUUC-Lma-053105	Leptosphaeria maculans	31.33	7.00e-60	224.00
IUUC-Pno-095141	Phaeosphaeria nodorum	29.71	1.00e-52	199.00
IUUC-Pte-104340	Pyrenophora teres	30.73	4.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence