iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005812

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_656732

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0007_787	Al_scaffold_0007_787	Al_scaffold_0007_787

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-43	143.1	310	343
UBD/Beta-Prp	5.00e-48	164.5	62	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd...tllvsGsdDgtikvWDlr 31
           H+ +v+++++ +d   +ll+sGsdD+ +k+W l 
   Q: 310  HEKDVNSVQWaPDkesRLLASGSDDKMVKIWKLA 343
           999********5555689*************986 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcv 87
           +l+g+h+  ++++++sp+ +llat+s dgt+ vw+++  +   ++ l+ he+ev++v+++ +g++l+t+++D+ + +w   + + ++c 
   Q: 62   VLEGTHTRTVKSLAWSPSAKLLATASFDGTTCVWENFATDSesVSVLQVHESEVKSVSWNASGSLLATCGRDKSVWIWevlPENEFDCA 150
           56778888888888888888888888888888888776655557777888888888888888888888888888888855444588888 PP
   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgq....clee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
            +l+gh+++v  + ++p+ d+l s s d+t+++w  e ++    c+++    ++gh+++v++++++  g+ +v++s+D tv++W
   Q: 151  AVLTGHSEDVKMVLWHPTMDVLFSCSYDNTVKIWWSEDEYgdynCVQTlgeSNNGHSSTVWSISFNAAGDKMVTCSDDLTVKIW 234
           888888888888888888888888888888888744444322224444777888888888888888888888888888888888 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Protein Sequence
(Fasta)

MKLMDKNLGL VEVQKLEGHT DRVWNVAWNP AADGVLASCS ADKTVRIWEQ SSLTRSWTCK 60
AVLEGTHTRT VKSLAWSPSA KLLATASFDG TTCVWENFAT DSESVSVLQV HESEVKSVSW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATTGA TGGATAAGAA TTTAGGGTTA GTGGAGGTTC AGAAACTTGA AGGTCACACC 60
GATCGTGTTT GGAACGTCGC CTGGAATCCC GCCGCCGACG GTGTTCTTGC CTCCTGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR028608--CIAO1/Cia1
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0016226--P:iron-sulfur cluster assembly

KEGG

aly:ARALYDRAFT_656732

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006580	Arabidopsis thaliana	85.63	1.00e-163	568.00
IUUC-Afl-008639	Aspergillus flavus	30.61	2.00e-40	159.00
IUUC-Ang-009758	Aspergillus niger	32.33	2.00e-41	162.00
IUUC-Aor-010212	Aspergillus oryzae	30.61	2.00e-40	159.00
IUUC-Cre-022811	Chlamydomonas reinhardtii	46.02	2.00e-79	288.00
IUUC-Dre-028172	Danio rerio	48.08	8.00e-83	299.00
IUUC-Dse-031535	Dothistroma septosporum	27.75	4.00e-35	141.00
IUUC-Gac-042499	Gasterosteus aculeatus	47.80	3.00e-75	274.00
IUUC-Ola-087379	Oryzias latipes	48.51	2.00e-75	275.00
IUUC-Pfo-096396	Poecilia formosa	48.06	6.00e-77	280.00
IUUC-Pte-104315	Pyrenophora teres	30.75	3.00e-39	155.00
IUUC-Pyt-104825	Pyrenophora triticirepentis	30.99	7.00e-40	157.00
IUUC-Tru-118382	Takifugu rubripes	49.85	3.00e-89	320.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence