iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112918

Ensembl Protein ID

PGSC0003DMT400015634

UniProt Accession

M1A6B7; M1A6B7_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006102	PGSC0003DMT400015634	PGSC0003DMT400015634

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-20	72.7	260	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            ++f+C I++ +M dPv l++G   +r+sI+ w++sg+k +P t+++l++ ++ Pnl lr+liq+w e n
   Q: 260  FKAFICCITGIIMVDPVSLCTGTACERASIQAWFDSGEKIDPETGEELQDLSIRPNLQLRQLIQEWKELN 329
           579***************************************************************8765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAELVPIGTI LAVISSQVMK TAQAANDVVF EKESFKVLGN YLLDIEPVLK ELQLQKLNES 60
PAARQALESI EADLKKANDL VEKYKNRARF YLLVKCRSIV KEVQEVTRDI GKSLAALSLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATCTCAG ATTTTCATCT TCGGGAAAGC TGCTTAATTT GTCGAAAATC TGAAATAGTG 60
ATTAGTGAGT AGATTGTTGG AGTAGAGACA GTATGTTGAA TGCAAAAGAA CTTGCTTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102584351

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002585	Amborella trichopoda	47.10	0.00e+00	867.00
IUUC-Gma-043747	Glycine max	60.74	0.00e+00	1192.00
IUUC-Mtr-058126	Medicago truncatula	59.92	0.00e+00	1156.00
IUUC-Mac-064921	Musa acuminata	48.81	0.00e+00	885.00
IUUC-Pop-100009	Populus trichocarpa	63.53	0.00e+00	1262.00
IUUC-Ppe-101705	Prunus persica	65.09	0.00e+00	1245.00
IUUC-Smo-109574	Selaginella moellendorffii	35.68	2.00e-143	502.00
IUUC-Sly-111263	Solanum lycopersicum	96.97	5.00e-179	619.00
IUUC-Tca-121788	Theobroma cacao	64.13	0.00e+00	1244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence