iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058695

Ensembl Protein ID

AET03186

UniProt Accession

G7LG72; A0A0C3Y1P3; G7LG72_MEDTR

Genbank Protein ID

AET03186.2

Protein Name

PPR containing plant-like protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g065730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g065730	AET03186	AET03186

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	22.76	6.30e-01	33.10	IUUC-Cel-018324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSLSHSSSSN HYCALLKLCC ETHNFTKAKN LHSHIIKTLP YPETFLLNNL ISSYAKLGSI 60
PYASKVFDQM PHPNLYSWNT ILSAYSKLGR VSEMEYLFDA MPRRDGVSWN SLISGYAGCG 120

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Nucleotide Sequence
(Fasta)

ATGTCACTCT CACACTCTTC TTCCTCAAAC CATTACTGTG CATTACTCAA ACTTTGCTGC 60
GAAACTCACA ACTTCACCAA AGCAAAAAAC CTCCATTCTC ACATCATCAA AACCCTTCCA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032867--DYW_dom
IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

PS51375--PPR

Pfam

PF14432--DYW_deaminase
PF01535--PPR
PF13041--PPR_2

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g065730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002827	Amborella trichopoda	31.53	8.00e-67	247.00
IUUC-Aly-006321	Arabidopsis lyrata	36.08	2.00e-67	249.00
IUUC-Ath-006990	Arabidopsis thaliana	28.51	4.00e-95	342.00
IUUC-Bdi-014037	Brachypodium distachyon	28.78	7.00e-55	207.00
IUUC-Bol-016246	Brassica oleracea	34.64	2.00e-145	509.00
IUUC-Cel-018324	Caenorhabditis elegans	22.76	1.50e-02	33.50
IUUC-Cne-026925	Cryptococcus neoformans	28.89	1.80e-01	30.80
IUUC-Cme-027279	Cyanidioschyzon merolae	25.32	6.00e-01	28.50
IUUC-Lpe-050946	Leersia perrieri	63.21	0.00e+00	981.00
IUUC-Oba-075207	Oryza barthii	33.33	2.00e-74	273.00
IUUC-Ome-081873	Oryza meridionalis	37.27	5.00e-77	281.00
IUUC-Pop-100074	Populus trichocarpa	25.97	1.00e-17	82.80
IUUC-Ppe-101554	Prunus persica	29.64	1.00e-96	347.00
IUUC-Smo-109647	Selaginella moellendorffii	33.29	3.00e-135	474.00
IUUC-Tca-121040	Theobroma cacao	34.58	1.00e-106	380.00
IUUC-Tur-126385	Triticum urartu	67.77	0.00e+00	893.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence