iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-24	85.2	273	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gH+ sv +la+  ++ +ll+s+s Dg+ik+WD+r+ +
   Q: 273  GHKKSVEDLAWspTEtGLLASCSADGSIKLWDTRSAP 309
           8***********6558****************99865 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSGENDVEMH DEDPVEDIDE SEEEVDETDD EDEEVPENQR QAYIPGLSRP LKKGEELDFD 60
PSAYKLFHSF NSDWPCLSFD VVKDGLGENR TQFPAECYIV SGTQADKPRD NEIIVMGLKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACACCCT CTGAAGTTCC AAATATTACC TCATCCGCTT TTTCTAACAT TTCTTAAGAG 60
ATATATTCTG TATCTGCAGA AAATGTCCGG TGAAAATGAC GTTGAAATGC ATGATGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

cel:CELE_Y54H5A.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	40.14	2.00e-74	271.00
IUUC-Aml-002309	Ailuropoda melanoleuca	44.58	2.00e-106	378.00
IUUC-Atr-002461	Amborella trichopoda	42.30	4.00e-90	324.00
IUUC-Aca-004760	Anolis carolinensis	45.10	6.00e-104	369.00
IUUC-Aly-005405	Arabidopsis lyrata	40.68	4.00e-84	303.00
IUUC-Ath-007178	Arabidopsis thaliana	41.23	3.00e-84	304.00
IUUC-Ago-007735	Ashbya gossypii	32.72	3.00e-64	238.00
IUUC-Acl-008294	Aspergillus clavatus	36.51	2.00e-74	271.00
IUUC-Afl-008486	Aspergillus flavus	35.99	3.00e-71	261.00
IUUC-Afu-009019	Aspergillus fumigatus	37.19	1.00e-75	275.00
IUUC-Ani-009465	Aspergillus nidulans	35.62	2.00e-71	261.00
IUUC-Ang-009641	Aspergillus niger	37.19	2.00e-70	258.00
IUUC-Ate-010426	Aspergillus terreus	36.96	8.00e-75	273.00
IUUC-Ame-010856	Astyanax mexicanus	42.00	2.00e-99	355.00
IUUC-Bgr-012258	Blumeria graminis	37.27	5.00e-63	233.00
IUUC-Bta-012437	Bos taurus	43.29	3.00e-104	370.00
IUUC-Bci-013647	Botrytis cinerea	38.36	1.00e-74	272.00
IUUC-Bdi-014728	Brachypodium distachyon	42.96	4.00e-88	317.00
IUUC-Bol-015126	Brassica oleracea	40.50	3.00e-84	304.00
IUUC-Bra-017677	Brassica rapa	42.86	4.00e-41	160.00
IUUC-Cja-018859	Callithrix jacchus	43.50	6.00e-105	372.00
IUUC-Cfa-020912	Canis familiaris	43.50	1.00e-105	375.00
IUUC-Cpo-021368	Cavia porcellus	44.21	3.00e-105	374.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	39.43	3.00e-44	171.00
IUUC-Csa-023599	Chlorocebus sabaeus	44.68	7.00e-106	375.00
IUUC-Cin-025718	Ciona intestinalis	42.08	3.00e-98	350.00
IUUC-Csv-025806	Ciona savignyi	44.59	1.00e-77	281.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	34.54	1.00e-56	212.00
IUUC-Cne-026781	Cryptococcus neoformans	40.18	3.00e-79	287.00
IUUC-Cme-027129	Cyanidioschyzon merolae	36.88	1.00e-46	179.00
IUUC-Dre-028225	Danio rerio	44.76	2.00e-104	371.00
IUUC-Dno-029792	Dasypus novemcinctus	43.69	8.00e-101	359.00
IUUC-Dor-030773	Dipodomys ordii	39.35	1.00e-39	155.00
IUUC-Dse-031289	Dothistroma septosporum	36.16	7.00e-67	246.00
IUUC-Dme-031676	Drosophila melanogaster	43.03	2.00e-102	364.00
IUUC-Ete-033042	Echinops telfairi	51.46	6.00e-23	100.00
IUUC-Eca-033618	Equus caballus	43.97	9.00e-105	372.00
IUUC-Fca-036102	Felis catus	44.71	4.00e-105	373.00
IUUC-Fox-037899	Fusarium oxysporum	34.34	5.00e-66	243.00
IUUC-Fso-038130	Fusarium solani	35.03	4.00e-67	247.00
IUUC-Gmo-038741	Gadus morhua	44.39	3.00e-101	360.00
IUUC-Ggr-040086	Gaeumannomyces graminis	35.08	6.00e-67	246.00
IUUC-Gac-042243	Gasterosteus aculeatus	45.11	2.00e-104	370.00
IUUC-Gma-044177	Glycine max	41.10	3.00e-87	314.00
IUUC-Ggo-044564	Gorilla gorilla	43.74	4.00e-106	376.00
IUUC-Hsa-046021	Homo sapiens	44.68	1.00e-106	378.00
IUUC-Hvu-047721	Hordeum vulgare	41.40	2.00e-80	291.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	43.97	3.00e-106	377.00
IUUC-Kpa-049271	Komagataella pastoris	34.72	1.00e-65	242.00
IUUC-Lch-049974	Latimeria chalumnae	38.78	1.00e-95	342.00
IUUC-Lpe-051388	Leersia perrieri	39.40	2.00e-74	271.00
IUUC-Lma-053010	Leptosphaeria maculans	35.93	3.00e-70	257.00
IUUC-Laf-054058	Loxodonta africana	43.97	9.00e-105	372.00
IUUC-Mcc-055246	Macaca mulatta	44.21	6.00e-106	376.00
IUUC-Meu-056795	Macropus eugenii	42.82	8.00e-97	345.00
IUUC-Mor-057175	Magnaporthe oryzae	36.01	1.00e-66	246.00
IUUC-Mpo-057388	Magnaporthe poae	33.64	2.00e-54	204.00
IUUC-Mtr-057752	Medicago truncatula	40.09	2.00e-84	304.00
IUUC-Mla-058904	Melampsora laricipopulina	41.78	2.00e-85	308.00
IUUC-Mvi-060525	Microbotryum violaceum	40.68	5.00e-79	286.00
IUUC-Mmr-060905	Microcebus murinus	44.68	2.00e-106	378.00
IUUC-Mmu-063428	Mus musculus	44.21	3.00e-105	374.00
IUUC-Mac-065276	Musa acuminata	40.93	1.00e-85	308.00
IUUC-Mpu-066062	Mustela putorius furo	44.58	4.00e-107	380.00
IUUC-Mlu-068115	Myotis lucifugus	49.32	3.00e-64	236.00
IUUC-Nfi-068512	Neosartorya fischeri	36.51	2.00e-72	265.00
IUUC-Ncr-068629	Neurospora crassa	35.92	1.00e-68	252.00
IUUC-Nle-070016	Nomascus leucogenys	43.23	4.00e-99	353.00
IUUC-Ont-072230	Oreochromis niloticus	43.33	1.00e-102	365.00
IUUC-Oan-072759	Ornithorhynchus anatinus	34.15	2.00e-59	221.00
IUUC-Ocu-074511	Oryctolagus cuniculus	42.79	4.00e-102	363.00
IUUC-Oba-075093	Oryza barthii	40.51	2.00e-79	288.00
IUUC-Obr-076130	Oryza brachyantha	41.34	7.00e-85	306.00
IUUC-Ogl-077167	Oryza glaberrima	42.03	2.00e-86	311.00
IUUC-Ogu-078111	Oryza glumaepatula	40.10	5.00e-73	268.00
IUUC-Oin-079564	Oryza indica	40.56	1.00e-79	288.00
IUUC-Olo-080909	Oryza longistaminata	34.44	5.00e-69	254.00
IUUC-Ome-081768	Oryza meridionalis	40.82	4.00e-76	277.00
IUUC-Oni-082453	Oryza nivara	41.13	3.00e-80	292.00
IUUC-Opu-084133	Oryza punctata	40.10	1.00e-69	256.00
IUUC-Oru-085056	Oryza rufipogon	39.72	3.00e-61	227.00
IUUC-Osa-085735	Oryza sativa	42.03	2.00e-86	311.00
IUUC-Ola-087066	Oryzias latipes	44.15	1.00e-97	348.00
IUUC-Olu-087594	Ostreococcus lucimarinus	40.48	2.00e-80	291.00
IUUC-Oga-087974	Otolemur garnettii	43.26	7.00e-105	372.00
IUUC-Oar-089902	Ovis aries	43.53	3.00e-105	374.00
IUUC-Ptr-090469	Pan troglodytes	40.80	1.00e-96	345.00
IUUC-Pan-092858	Papio anubis	44.68	6.00e-106	376.00
IUUC-Psi-094092	Pelodiscus sinensis	41.23	5.00e-61	226.00
IUUC-Pno-094919	Phaeosphaeria nodorum	36.75	1.00e-65	242.00
IUUC-Ppa-095849	Physcomitrella patens	38.01	1.00e-85	309.00
IUUC-Pfo-096535	Poecilia formosa	43.51	9.00e-101	358.00
IUUC-Pab-098478	Pongo abelii	44.44	7.00e-106	376.00
IUUC-Pop-100032	Populus trichocarpa	41.57	5.00e-87	313.00
IUUC-Pca-100403	Procavia capensis	44.44	3.00e-74	270.00
IUUC-Ppe-101997	Prunus persica	40.45	7.00e-85	306.00
IUUC-Pva-102423	Pteropus vampyrus	43.97	5.00e-106	376.00
IUUC-Pgr-103339	Puccinia graminis	40.44	9.00e-83	299.00
IUUC-Ptt-103937	Puccinia triticina	40.44	4.00e-82	297.00
IUUC-Pte-104051	Pyrenophora teres	36.36	6.00e-68	250.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	36.82	2.00e-68	251.00
IUUC-Rno-106118	Rattus norvegicus	43.70	1.00e-99	355.00
IUUC-Sce-106330	Saccharomyces cerevisiae	34.47	7.00e-65	239.00
IUUC-Sha-106564	Sarcophilus harrisii	42.20	1.00e-78	285.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	35.66	4.00e-76	277.00
IUUC-Spo-108351	Schizosaccharomyces pombe	35.83	1.00e-77	282.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	39.73	7.00e-76	276.00
IUUC-Smo-109619	Selaginella moellendorffii	39.73	2.00e-82	298.00
IUUC-Sit-110719	Setaria italica	42.26	8.00e-86	309.00
IUUC-Sly-111245	Solanum lycopersicum	40.09	8.00e-77	279.00
IUUC-Stu-112645	Solanum tuberosum	40.09	6.00e-82	296.00
IUUC-Sar-113342	Sorex araneus	43.91	3.00e-94	337.00
IUUC-Sbi-114359	Sorghum bicolor	42.03	5.00e-86	310.00
IUUC-Sre-115098	Sporisorium reilianum	39.87	4.00e-80	290.00
IUUC-Ssc-115496	Sus scrofa	43.26	6.00e-105	372.00
IUUC-Tru-117662	Takifugu rubripes	44.15	6.00e-102	363.00
IUUC-Tni-120564	Tetraodon nigroviridis	40.55	3.00e-82	297.00
IUUC-Tca-121710	Theobroma cacao	41.27	5.00e-87	313.00
IUUC-Tre-122239	Trichoderma reesei	36.66	2.00e-70	258.00
IUUC-Tvi-122589	Trichoderma virens	35.73	4.00e-69	254.00
IUUC-Tae-125574	Triticum aestivum	43.16	4.00e-86	310.00
IUUC-Tur-126135	Triticum urartu	43.69	6.00e-67	247.00
IUUC-Tme-127073	Tuber melanosporum	34.48	2.00e-63	235.00
IUUC-Ttr-128383	Tursiops truncatus	43.36	5.00e-104	369.00
IUUC-Uma-129345	Ustilago maydis	40.44	3.00e-84	304.00
IUUC-Vda-129893	Verticillium dahliae	35.27	2.00e-66	245.00
IUUC-Vvi-131067	Vitis vinifera	41.18	5.00e-87	313.00
IUUC-Xtr-132603	Xenopus tropicalis	47.17	2.00e-112	398.00
IUUC-Xma-133149	Xiphophorus maculatus	43.57	8.00e-102	362.00
IUUC-Yli-134459	Yarrowia lipolytica	34.42	5.00e-63	233.00
IUUC-Zma-135548	Zea mays	41.80	2.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence