iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018052

Ensembl Protein ID

Bra026955.1-P

UniProt Accession

M4EDU5; M4EDU5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026955	Bra026955.1	Bra026955.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-08	33.7	327	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh +C+ kw       + +++CPlC+
   Q: 327  CCICLSAYEDGteLRELPCGHHFHCSCVDKW------LYINATCPLCK 368
           ********88744777***************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTETTTNSS SFDPAPLLSS GDENEGRSNN GGERRSARRQ GLREAAMFLS RASSGGRAMR 60
EPSMLVREAA AEQLEERQSD WAYSKPVVVL DIVWNLAFVS VAAGVLVMSR DENPIMPLRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAACGG AGACTACAAC GAATTCGTCA TCCTTCGATC CGGCACCGTT GCTTTCGAGC 60
GGCGATGAAA ACGAGGGACG CAGCAACAAC GGCGGGGAAC GGAGATCCGC GAGGAGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000315	Aegilops tauschii	61.57	9.00e-82	296.00
IUUC-Atr-002539	Amborella trichopoda	64.22	2.00e-98	352.00
IUUC-Ath-007048	Arabidopsis thaliana	85.64	3.00e-150	524.00
IUUC-Bdi-014788	Brachypodium distachyon	63.04	2.00e-107	381.00
IUUC-Bol-015185	Brassica oleracea	97.57	2.00e-147	514.00
IUUC-Gma-043453	Glycine max	65.96	2.00e-116	412.00
IUUC-Hvu-047150	Hordeum vulgare	64.42	2.00e-107	381.00
IUUC-Lpe-051532	Leersia perrieri	64.33	5.00e-101	360.00
IUUC-Mac-064658	Musa acuminata	66.76	6.00e-121	426.00
IUUC-Oba-075346	Oryza barthii	62.99	2.00e-107	381.00
IUUC-Obr-076817	Oryza brachyantha	61.94	2.00e-81	294.00
IUUC-Ogl-077385	Oryza glaberrima	62.99	2.00e-107	381.00
IUUC-Ogu-078850	Oryza glumaepatula	62.99	3.00e-107	381.00
IUUC-Oin-079121	Oryza indica	64.11	2.00e-96	345.00
IUUC-Olo-080611	Oryza longistaminata	62.40	1.00e-83	304.00
IUUC-Ome-081898	Oryza meridionalis	63.28	2.00e-99	355.00
IUUC-Oni-082330	Oryza nivara	62.99	2.00e-107	381.00
IUUC-Opu-083495	Oryza punctata	63.28	4.00e-101	361.00
IUUC-Oru-084814	Oryza rufipogon	62.99	2.00e-107	382.00
IUUC-Osa-085284	Oryza sativa	62.99	2.00e-107	382.00
IUUC-Pop-099381	Populus trichocarpa	68.62	1.00e-112	399.00
IUUC-Smo-108796	Selaginella moellendorffii	58.93	4.00e-100	357.00
IUUC-Sit-110742	Setaria italica	66.03	2.00e-109	389.00
IUUC-Sly-111350	Solanum lycopersicum	64.33	2.00e-93	335.00
IUUC-Sbi-114146	Sorghum bicolor	65.19	3.00e-107	381.00
IUUC-Tae-125841	Triticum aestivum	63.47	7.00e-107	380.00
IUUC-Vda-129814	Verticillium dahliae	52.94	1.00e-10	61.60
IUUC-Vvi-131280	Vitis vinifera	72.81	1.00e-112	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence