iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095516

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544902

Gene Name

PHYPADRAFT_23876

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S13_213V6	PP1S13_213V6.1	PP1S13_213V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-08	34.4	331	372

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg+ +  lpC H+fh +C+ kw       + +++CPlC+
   Q: 331  CCICLSSYEDGVELrdLPCSHHFHSTCIIKW------LRINATCPLCK 372
           ********9995544499*************......**********7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDRNRVSFSS STTESDIAVP LIQNGNGSSS SGSGSEGGSQ RGNRSRVQGA ARFLRRAGSR 60
RLMREPSMLV RESAAEQLEV RQSDWAYSKP VVVLDLIWNL AFVQVSLAVL VLSKKETNCN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCGCGCTG GGATCGTGGT GCATGCTCCC GTGCTCCCTT CCCTGCAGCC TTGGGACTCA 60
CGAGTGAGTG AATGGGGGGA GTAGGTTTTC GGGGAATGAA TGCCCCAGTG ATTTGAGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_23876

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000315	Aegilops tauschii	55.38	3.00e-72	264.00
IUUC-Atr-002539	Amborella trichopoda	59.02	6.00e-90	323.00
IUUC-Aly-006096	Arabidopsis lyrata	58.28	6.00e-91	326.00
IUUC-Ath-007048	Arabidopsis thaliana	57.66	3.00e-96	344.00
IUUC-Bdi-014105	Brachypodium distachyon	58.89	1.00e-93	335.00
IUUC-Bol-015362	Brassica oleracea	60.66	7.00e-97	346.00
IUUC-Bra-017355	Brassica rapa	60.06	2.00e-91	328.00
IUUC-Gma-043453	Glycine max	60.00	7.00e-98	349.00
IUUC-Hvu-047150	Hordeum vulgare	59.06	4.00e-97	347.00
IUUC-Lpe-051532	Leersia perrieri	59.57	4.00e-92	330.00
IUUC-Mtr-058388	Medicago truncatula	55.75	3.00e-103	367.00
IUUC-Mac-064732	Musa acuminata	61.40	2.00e-105	374.00
IUUC-Oba-075346	Oryza barthii	58.97	4.00e-97	347.00
IUUC-Obr-076817	Oryza brachyantha	57.14	5.00e-72	263.00
IUUC-Ogl-077385	Oryza glaberrima	58.97	4.00e-97	347.00
IUUC-Ogu-078850	Oryza glumaepatula	58.97	5.00e-97	347.00
IUUC-Oin-079121	Oryza indica	59.50	6.00e-85	306.00
IUUC-Olo-080611	Oryza longistaminata	58.66	1.00e-73	271.00
IUUC-Ome-081898	Oryza meridionalis	58.97	6.00e-90	323.00
IUUC-Oni-082330	Oryza nivara	58.97	4.00e-97	347.00
IUUC-Opu-083495	Oryza punctata	59.88	3.00e-92	331.00
IUUC-Oru-084814	Oryza rufipogon	58.97	6.00e-97	346.00
IUUC-Osa-085284	Oryza sativa	58.97	6.00e-97	346.00
IUUC-Ppe-101951	Prunus persica	53.46	3.00e-84	304.00
IUUC-Smo-108796	Selaginella moellendorffii	63.29	4.00e-106	377.00
IUUC-Sit-110740	Setaria italica	59.16	5.00e-88	317.00
IUUC-Sly-111350	Solanum lycopersicum	58.21	2.00e-85	308.00
IUUC-Stu-112503	Solanum tuberosum	58.79	4.00e-87	313.00
IUUC-Sbi-114737	Sorghum bicolor	61.01	3.00e-97	347.00
IUUC-Tca-121775	Theobroma cacao	58.41	1.00e-96	345.00
IUUC-Tae-123565	Triticum aestivum	58.73	3.00e-100	357.00
IUUC-Tur-126321	Triticum urartu	58.73	1.00e-100	359.00
IUUC-Vvi-130970	Vitis vinifera	58.12	7.00e-94	336.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence