iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109338

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377637

Gene Name

SELMODRAFT_123562

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_123562	EFJ12772	EFJ12772

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-25	88.7	252	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af........sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++sv +l  +f         d  +l+s+s Dgt+++WD+ t++++
   Q: 252  GHSSSVEDLqaSFhlhfwcptLDpFRLASCSSDGTLRLWDVPTCTCT 298
           68888777543234444786644355*****************9997 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MARPGRKKKA SCQQRHPELD ERRVWRPGVD PLDEGEELQY EPSAYDTIHA FRLGWPCLSF 60
DILRDELGAL RHEFPLTLFC TAGTQAANPA DNRLIVAKLT NISGKKRGVE LAASDDGDSS 120

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Nucleotide Sequence
(Fasta)

ATGGCGCGGC CAGGGAGGAA GAAAAAAGCG AGCTGCCAGC AGCGCCATCC AGAGCTGGAC 60
GAGCGTCGGG TATGGCGGCC GGGGGTTGAT CCACTCGACG AAGGCGAGGA ACTCCAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

smo:SELMODRAFT_123562

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022850	Chlamydomonas reinhardtii	37.16	2.00e-58	219.00
IUUC-Ete-033042	Echinops telfairi	49.00	2.00e-18	86.30
IUUC-Psi-094092	Pelodiscus sinensis	39.37	4.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence