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Tag Content
UUCD2 ID IUUC-Smo-108808
UUCD1 version UUC-SeM-00664
Ensembl Protein ID EFJ23079
UniProt Accession D8RYD0; D8RYD0_SELML
Genbank Protein ID EFJ23079.1
Protein Name Putative uncharacterized protein DDB1-2
Genbank Nucleotide ID GL377594
Gene Name DDB1-2; SELMODRAFT_151061
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SELMODRAFT_151061 EFJ23079 EFJ23079
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1 79.82 0.00e+00 1833.00 IUUC-Ath-006658
E3 adaptor/Cullin RING/DCX/DDB1 33.07 0.00e+00 632.00 IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1 46.15 0.00e+00 1009.00 IUUC-Dme-031940
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Selaginella moellendorffii
Protein Sequence
(Fasta)
MSVWNYVVTA HKPTNVTHSC VGNFTSPHEL NLIIAKCTRI EFHLLTAQGL QPLLDVPIYG 60
RIATLELFRP PGETQDVLFV STERYKFCVL QWDSETTELV TRAMGDVSDR IGRPTDNGQI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Smo-108808|E3,DDB1|Selaginella moellendorffii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAGCGTCT GGAATTACGT CGTCACTGCG CACAAGCCAA CCAATGTGAC GCACTCGTGC 60
GTTGGAAATT TCACGAGCCC CCACGAGCTC AATCTCATCA TCGCGTAAGT CCCTGTTTAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Smo-108808|E3,DDB1|Selaginella moellendorffii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
Pfam

PF03178--CPSF_A
Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair
KEGG smo:SELMODRAFT_151061
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000120 Aegilops tauschii 72.81 0.00e+00 1712.00
IUUC-Aml-002096 Ailuropoda melanoleuca 52.53 0.00e+00 1211.00
IUUC-Atr-002742 Amborella trichopoda 81.74 0.00e+00 1861.00
IUUC-Apl-003624 Anas platyrhynchos 51.94 0.00e+00 1170.00
IUUC-Aca-005085 Anolis carolinensis 52.58 0.00e+00 1206.00
IUUC-Aly-005857 Arabidopsis lyrata 79.82 0.00e+00 1834.00
IUUC-Ath-006658 Arabidopsis thaliana 79.82 0.00e+00 1833.00
IUUC-Ame-011643 Astyanax mexicanus 46.98 0.00e+00 1019.00
IUUC-Bgr-012164 Blumeria graminis 29.27 1.00e-125 443.00
IUUC-Bta-012494 Bos taurus 52.53 0.00e+00 1210.00
IUUC-Bci-013957 Botrytis cinerea 29.65 5.00e-117 415.00
IUUC-Bdi-014186 Brachypodium distachyon 76.47 0.00e+00 1751.00
IUUC-Bol-015922 Brassica oleracea 79.08 0.00e+00 1812.00
IUUC-Bra-017300 Brassica rapa 79.08 0.00e+00 1806.00
IUUC-Cel-018239 Caenorhabditis elegans 32.95 5.00e-179 621.00
IUUC-Cfa-020406 Canis familiaris 52.53 0.00e+00 1211.00
IUUC-Cpo-022154 Cavia porcellus 52.53 0.00e+00 1210.00
IUUC-Cre-022557 Chlamydomonas reinhardtii 50.35 0.00e+00 1011.00
IUUC-Cho-024554 Choloepus hoffmanni 48.49 6.00e-139 488.00
IUUC-Cin-025466 Ciona intestinalis 48.70 0.00e+00 1084.00
IUUC-Csv-026370 Ciona savignyi 47.16 0.00e+00 964.00
IUUC-Dre-027448 Danio rerio 52.59 9.00e-168 582.00
IUUC-Dno-029794 Dasypus novemcinctus 52.73 0.00e+00 1151.00
IUUC-Dor-030789 Dipodomys ordii 45.28 9.00e-122 430.00
IUUC-Dse-031491 Dothistroma septosporum 31.01 5.00e-138 484.00
IUUC-Dme-031940 Drosophila melanogaster 46.15 0.00e+00 993.00
IUUC-Eca-033777 Equus caballus 52.27 0.00e+00 1202.00
IUUC-Eeu-034900 Erinaceus europaeus 49.58 9.00e-168 583.00
IUUC-Fca-035869 Felis catus 52.53 0.00e+00 1211.00
IUUC-Fal-036777 Ficedula albicollis 52.22 0.00e+00 1197.00
IUUC-Fso-038292 Fusarium solani 28.18 2.00e-129 456.00
IUUC-Gmo-038815 Gadus morhua 46.69 7.00e-153 533.00
IUUC-Ggr-039907 Gaeumannomyces graminis 28.12 1.00e-123 437.00
IUUC-Gga-040995 Gallus gallus 52.45 0.00e+00 1207.00
IUUC-Gac-042390 Gasterosteus aculeatus 52.42 0.00e+00 1139.00
IUUC-Gma-042904 Glycine max 81.01 0.00e+00 1796.00
IUUC-Ggo-044891 Gorilla gorilla 52.31 0.00e+00 1206.00
IUUC-Hvu-047504 Hordeum vulgare 76.08 0.00e+00 1738.00
IUUC-Itr-048678 Ictidomys tridecemlineatus 52.62 0.00e+00 1211.00
IUUC-Lch-050565 Latimeria chalumnae 52.53 0.00e+00 1200.00
IUUC-Loc-052091 Lepisosteus oculatus 48.33 0.00e+00 824.00
IUUC-Laf-053502 Loxodonta africana 52.36 0.00e+00 1206.00
IUUC-Mcc-054802 Macaca mulatta 53.05 0.00e+00 1200.00
IUUC-Meu-056808 Macropus eugenii 54.02 0.00e+00 800.00
IUUC-Mla-059154 Melampsora laricipopulina 26.45 5.00e-96 345.00
IUUC-Mga-059824 Meleagris gallopavo 52.18 0.00e+00 1124.00
IUUC-Mvi-060279 Microbotryum violaceum 29.65 2.00e-127 449.00
IUUC-Mmr-061215 Microcebus murinus 52.27 0.00e+00 1199.00
IUUC-Mdo-062028 Monodelphis domestica 50.46 0.00e+00 963.00
IUUC-Mmu-064327 Mus musculus 52.53 0.00e+00 1210.00
IUUC-Mac-065445 Musa acuminata 80.92 0.00e+00 1816.00
IUUC-Mpu-065814 Mustela putorius furo 50.70 0.00e+00 1147.00
IUUC-Mlu-067136 Myotis lucifugus 52.53 0.00e+00 1204.00
IUUC-Opr-070915 Ochotona princeps 51.20 0.00e+00 905.00
IUUC-Ont-071753 Oreochromis niloticus 52.88 0.00e+00 1201.00
IUUC-Oan-073187 Ornithorhynchus anatinus 53.04 0.00e+00 1099.00
IUUC-Ocu-074619 Oryctolagus cuniculus 52.53 0.00e+00 1212.00
IUUC-Oba-075091 Oryza barthii 72.93 0.00e+00 1176.00
IUUC-Obr-076425 Oryza brachyantha 76.68 0.00e+00 1750.00
IUUC-Ogu-078794 Oryza glumaepatula 76.81 0.00e+00 1756.00
IUUC-Oin-079725 Oryza indica 75.94 0.00e+00 1723.00
IUUC-Olo-080842 Oryza longistaminata 73.72 0.00e+00 1578.00
IUUC-Ome-081818 Oryza meridionalis 76.90 0.00e+00 1758.00
IUUC-Oni-082879 Oryza nivara 76.17 0.00e+00 1736.00
IUUC-Opu-083361 Oryza punctata 75.77 0.00e+00 1748.00
IUUC-Oru-084781 Oryza rufipogon 76.81 0.00e+00 1756.00
IUUC-Osa-086293 Oryza sativa 76.81 0.00e+00 1756.00
IUUC-Ola-086881 Oryzias latipes 52.61 0.00e+00 1195.00
IUUC-Olu-087674 Ostreococcus lucimarinus 55.91 0.00e+00 1184.00
IUUC-Oga-089056 Otolemur garnettii 52.53 0.00e+00 1210.00
IUUC-Oar-089457 Ovis aries 53.14 0.00e+00 1200.00
IUUC-Psi-093407 Pelodiscus sinensis 52.48 0.00e+00 1182.00
IUUC-Pma-094272 Petromyzon marinus 52.53 0.00e+00 1100.00
IUUC-Pno-094864 Phaeosphaeria nodorum 30.73 7.00e-135 474.00
IUUC-Ppa-095885 Physcomitrella patens 83.93 0.00e+00 1871.00
IUUC-Pfo-096083 Poecilia formosa 52.93 0.00e+00 1204.00
IUUC-Pop-099593 Populus trichocarpa 80.00 0.00e+00 1776.00
IUUC-Pca-100189 Procavia capensis 50.59 0.00e+00 674.00
IUUC-Ppe-101987 Prunus persica 79.82 0.00e+00 1749.00
IUUC-Pva-102605 Pteropus vampyrus 52.36 0.00e+00 1205.00
IUUC-Pte-104233 Pyrenophora teres 31.48 8.00e-146 510.00
IUUC-Pyt-104454 Pyrenophora triticirepentis 31.85 2.00e-142 499.00
IUUC-Rno-106004 Rattus norvegicus 52.53 0.00e+00 1211.00
IUUC-Sha-106726 Sarcophilus harrisii 51.30 0.00e+00 1089.00
IUUC-Sja-107864 Schizosaccharomyces japonicus 25.80 5.00e-94 338.00
IUUC-Sit-109735 Setaria italica 77.05 0.00e+00 1758.00
IUUC-Sly-111520 Solanum lycopersicum 78.92 0.00e+00 1791.00
IUUC-Sar-113606 Sorex araneus 50.41 2.00e-67 250.00
IUUC-Sbi-114539 Sorghum bicolor 74.50 0.00e+00 1732.00
IUUC-Sre-114936 Sporisorium reilianum 24.75 8.00e-66 245.00
IUUC-Ssc-116038 Sus scrofa 52.45 0.00e+00 1207.00
IUUC-Tgu-117512 Taeniopygia guttata 52.19 0.00e+00 1197.00
IUUC-Tru-117593 Takifugu rubripes 52.40 0.00e+00 1187.00
IUUC-Tsy-119513 Tarsius syrichta 49.68 2.00e-177 615.00
IUUC-Tni-120551 Tetraodon nigroviridis 49.11 0.00e+00 946.00
IUUC-Tre-122136 Trichoderma reesei 28.10 3.00e-118 419.00
IUUC-Tvi-122512 Trichoderma virens 28.75 5.00e-126 444.00
IUUC-Tae-122891 Triticum aestivum 76.26 0.00e+00 1740.00
IUUC-Tur-126451 Triticum urartu 75.58 0.00e+00 1551.00
IUUC-Tme-127057 Tuber melanosporum 30.68 1.00e-127 450.00
IUUC-Ttr-128891 Tursiops truncatus 50.45 0.00e+00 761.00
IUUC-Vda-129870 Verticillium dahliae 28.31 1.00e-116 414.00
IUUC-Vpa-130117 Vicugna pacos 48.92 0.00e+00 907.00
IUUC-Vvi-131033 Vitis vinifera 80.73 0.00e+00 1824.00
IUUC-Xtr-131987 Xenopus tropicalis 51.83 0.00e+00 1169.00
IUUC-Xma-134117 Xiphophorus maculatus 52.18 0.00e+00 1176.00
IUUC-Zma-134758 Zea mays 76.72 0.00e+00 1763.00
Created Date 25-Jun-2017

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