iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131320

Ensembl Protein ID

VIT_08s0056g00040.t01

UniProt Accession

F6HMQ1; F6HMQ1_VITVI

Genbank Protein ID

CCB55926.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595995

Gene Name

VIT_08s0056g00040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0056g00040	VIT_08s0056g00040.t01	VIT_08s0056g00040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-08	32.7	230	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWDlr 31
           gH++s++cl  f   s+  ll+sG+ Dg + +W+ +
   Q: 230  GHKGSISCLMtFmasSGeALLISGASDGLLILWSAD 265
           8*******9659**766789*************965 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASWEVNQNS FCHGNLTKKE MLRLRTFRPT NDKIVKIQLH PTHPWLVTAD ASDHVSVWNW 60
EHRQVIYELK AGGIDERRLV GAKLEKLAEG ESEPKGKPTE AMRGGSVKQV DFYDDDVRFW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTT GGGAAGTCAA TCAAAACTCA TTTTGTCATG GAAACCTAAC CAAGTAACTA 60
AGCCCCAAGA CTTTTTTTCC GGGATTTTAG TCCATGCAAT ATGAAATGGG AGTCTAAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013103--RVT_2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07727--RVT_2

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	79.20	0.00e+00	774.00
IUUC-Atr-002897	Amborella trichopoda	81.07	0.00e+00	1204.00
IUUC-Aly-006154	Arabidopsis lyrata	85.39	0.00e+00	1164.00
IUUC-Ath-007285	Arabidopsis thaliana	85.79	0.00e+00	1171.00
IUUC-Bdi-014824	Brachypodium distachyon	81.10	0.00e+00	1112.00
IUUC-Bol-015400	Brassica oleracea	83.91	0.00e+00	1174.00
IUUC-Bra-017475	Brassica rapa	82.04	0.00e+00	1172.00
IUUC-Gma-043699	Glycine max	87.92	0.00e+00	1286.00
IUUC-Hvu-047404	Hordeum vulgare	83.54	1.00e-141	494.00
IUUC-Mtr-058798	Medicago truncatula	86.58	0.00e+00	1227.00
IUUC-Mac-065076	Musa acuminata	86.46	0.00e+00	1183.00
IUUC-Oba-075727	Oryza barthii	82.44	0.00e+00	1168.00
IUUC-Obr-076460	Oryza brachyantha	82.21	0.00e+00	1156.00
IUUC-Ogl-077837	Oryza glaberrima	82.44	0.00e+00	1165.00
IUUC-Ogu-078912	Oryza glumaepatula	82.44	0.00e+00	1166.00
IUUC-Oin-079644	Oryza indica	82.44	0.00e+00	1164.00
IUUC-Olo-080463	Oryza longistaminata	81.09	0.00e+00	855.00
IUUC-Ome-081748	Oryza meridionalis	82.44	0.00e+00	1163.00
IUUC-Oni-083096	Oryza nivara	82.44	0.00e+00	1166.00
IUUC-Opu-083280	Oryza punctata	81.89	0.00e+00	1186.00
IUUC-Oru-084728	Oryza rufipogon	82.44	0.00e+00	1165.00
IUUC-Osa-085295	Oryza sativa	82.44	0.00e+00	1164.00
IUUC-Ppa-095297	Physcomitrella patens	60.88	0.00e+00	869.00
IUUC-Ppe-101567	Prunus persica	90.08	0.00e+00	1276.00
IUUC-Smo-109297	Selaginella moellendorffii	63.07	0.00e+00	899.00
IUUC-Sit-109913	Setaria italica	81.64	0.00e+00	1169.00
IUUC-Sly-110980	Solanum lycopersicum	86.04	0.00e+00	1175.00
IUUC-Stu-112643	Solanum tuberosum	86.17	0.00e+00	1181.00
IUUC-Sbi-114411	Sorghum bicolor	81.58	0.00e+00	1162.00
IUUC-Tsy-119279	Tarsius syrichta	29.29	2.00e-05	43.90
IUUC-Tca-121691	Theobroma cacao	88.72	0.00e+00	1258.00
IUUC-Tae-124034	Triticum aestivum	80.97	0.00e+00	1071.00
IUUC-Tur-126798	Triticum urartu	79.20	0.00e+00	771.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence