iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015359

Ensembl Protein ID

Bo8g105910.1

UniProt Accession

A0A0D3DX41; A0A0D3DX41_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g105910	Bo8g105910.1	Bo8g105910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-20	72.6	461	499
UBD/Beta-Prp	2.30e-53	182.9	420	747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  ++  l +++++dD+tikvWD  tgv+ 
   Q: 461  HVGGVNDISFstPNkQLcVITCGDDKTIKVWDAATGVKR 499
           999*******98664334799***********9999875 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           ++ v +spd+sl+ +++ ++ +++++++ g       ++  h ++v++++fs   k    +t+++D+tikvwd  tg   ht++ghe+ v+s+  + 
   Q: 420  VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDmrqHLEIDAHVGGVNDISFSTPNKqlCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516
           455778**********************9998333334589***********88777899********************************85554 PP
   S: 105  ..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..Dr..tvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
             + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++  D+   +  W+ + g + rt +g h++s   ++fd ++++ 
   Q: 517  keNIQFIFSTALDGKIKAWLYDNMGSRVDYDAPG-RWCTTMAYSADGTRLFSCGTskDGesYIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRY 612
           4388***************999877777566655.5999999*****999998652244224666999***************************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn......................... 264
           +++++d ++k+wd+ + + + +  g    +   ++rf +++ +l++ + +++i++  +++   ll+t+++                           
   Q: 613  LAAGDDFSIKFWDMDNVQLLTAIDGDGglQASPRIRFNKEGSLLAVSGNENVIKVMaNSDGLRLLHTFENVSsesskpainslataaaatsaaadrs 709
           ***************99999998887744555669999*****************8899999******99998889999988888888888888888 PP
   S: 265  ssvisvavlsfgdnvl......vlgsedskvniwklkk 296
            +v+s+++++ + +++      ++ ++++k +iwkl++
   Q: 710  ANVVSIQAMNGDARNMvdvkpvITEESNDKSKIWKLTE 747
           78888888666666666777767777799999999976 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAGEILVKD LKVFSTFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTC TTAGTAGAGA GCTTGTGTTC CTGATCTTAC AGTTTCTCGA TGAAGAGAAG 60
TTTAAAGAGA CTGTTCACAA GTAAAATCTT GCCTCCTCAT TCGATCTATT ATTCTGCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR011048--Haem_d1
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	76.59	0.00e+00	1768.00
IUUC-Aly-005995	Arabidopsis lyrata	95.58	0.00e+00	2144.00
IUUC-Ath-007021	Arabidopsis thaliana	95.84	0.00e+00	2150.00
IUUC-Bdi-014914	Brachypodium distachyon	76.20	0.00e+00	1733.00
IUUC-Bra-016893	Brassica rapa	98.76	0.00e+00	2153.00
IUUC-Gma-043911	Glycine max	83.73	0.00e+00	1899.00
IUUC-Hvu-047688	Hordeum vulgare	77.62	0.00e+00	1679.00
IUUC-Mac-065382	Musa acuminata	77.30	0.00e+00	1774.00
IUUC-Obr-076921	Oryza brachyantha	76.62	0.00e+00	1746.00
IUUC-Ogl-077334	Oryza glaberrima	76.99	0.00e+00	1757.00
IUUC-Ogu-078494	Oryza glumaepatula	76.99	0.00e+00	1757.00
IUUC-Oin-079720	Oryza indica	75.37	0.00e+00	1745.00
IUUC-Olo-081034	Oryza longistaminata	75.35	0.00e+00	1734.00
IUUC-Ome-081778	Oryza meridionalis	76.90	0.00e+00	1756.00
IUUC-Osa-085765	Oryza sativa	76.99	0.00e+00	1757.00
IUUC-Ppa-095845	Physcomitrella patens	67.75	0.00e+00	1545.00
IUUC-Smo-109617	Selaginella moellendorffii	68.61	0.00e+00	1497.00
IUUC-Sit-110288	Setaria italica	76.54	0.00e+00	1738.00
IUUC-Sly-111739	Solanum lycopersicum	82.19	0.00e+00	1875.00
IUUC-Sbi-114078	Sorghum bicolor	77.00	0.00e+00	1735.00
IUUC-Tae-125600	Triticum aestivum	77.25	0.00e+00	1771.00
IUUC-Tur-126412	Triticum urartu	76.75	0.00e+00	1772.00
IUUC-Vvi-131079	Vitis vinifera	83.19	0.00e+00	1907.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence