iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099105

Ensembl Protein ID

POPTR_0003s13270.1

UniProt Accession

B9GWW0; B9GWW0_POPTR

Genbank Protein ID

EEE79499.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_554421; POPTR_0003s13270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s13270	POPTR_0003s13270.1	POPTR_0003s13270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-07	30.8	410	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf............sdtllvsGsdDgtikvWDlrtgvl 35
           gHt+ v cla             s + lvsGs D+ti++WDl+tg+l
   Q: 410  GHTGAVLCLAAhrmmgaakgwsfS-HVLVSGSMDCTIRIWDLDTGNL 455
           799999999766778888776643.779****************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKCRSVACIW PDTPPPHKVT ASAALNHPPT LYTGGSDGSI LWWNLSSSDT NSEVDIAGVE 60
GNFPLGLEAR VLFGHCQRVR DMVELVPILK ESNAGGDDGS GSSKSSQLEV VNWGNKLSEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAAACTC GGTTACTGAC TCACTCGTAT GCACGCCTGA ACTAAACAGT CCATGAAGTG 60
CCGATCCGTG GCGTGTATAT GGCCAGATAC ACCTCCACCT CACAAAGTCA CCGCCTCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016024--ARM-type_fold
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0003s13270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051544	Leersia perrieri	49.14	0.00e+00	1134.00
IUUC-Oba-075713	Oryza barthii	49.60	0.00e+00	1131.00
IUUC-Ogl-077521	Oryza glaberrima	49.65	0.00e+00	1136.00
IUUC-Oin-080169	Oryza indica	49.72	0.00e+00	1139.00
IUUC-Oni-082333	Oryza nivara	49.92	0.00e+00	1138.00
IUUC-Opu-083952	Oryza punctata	49.30	0.00e+00	1137.00
IUUC-Oru-085112	Oryza rufipogon	49.53	0.00e+00	1131.00
IUUC-Olu-087828	Ostreococcus lucimarinus	29.86	1.00e-17	85.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence