iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108237

Ensembl Protein ID

SPAC1B3.13.1:pep

UniProt Accession

O13878; UTP17_SCHPO

Genbank Protein ID

CAB11248.2

Protein Name

U3 small nucleolar RNA-associated protein 17; U3 protein 17 required for transcription

Genbank Nucleotide ID

CU329670

Gene Name

nan1; utp17; SPAC1B3.13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC1B3.13	SPAC1B3.13.1	SPAC1B3.13.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.30e-07	27.3	503	530

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWDl 30
            vt+l+   s++++++ + D t+++W l
   Q: 503  VVTALKMmtSSNRFITVGTDATLRIWAL 530
           688999885449**************86 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs) (By similarity).

Protein Sequence
(Fasta)

MEGPNSMEVG SLEVKKNDKD PWSKTAYLGG RLVSKIPAVY SNDNKFVFLT YDTFIGIFSL 60
ITGDCINRIF FPNNLANLLP VAVLLSPENA FELYVIFQSG YVCVHDWSNS ELLRTMEIST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTATGCT ACAACCAAGT ATTTGGCTTT AACCAACCAC CATTGCGTTT TAATTCCAAC 60
CGGTTTTATT ATTTTTCGTT GGAGGAATAA AAATTATGGA AGGGCCTAAT TCTATGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0804--Transcription
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0030515--F:snoRNA binding
GO:0030490--P:maturation of SSU-rRNA
GO:0006351--P:transcription, DNA-templated

KEGG

spo:SPAC1B3.13

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001159	Aegilops tauschii	23.05	9.00e-08	50.40
IUUC-Aml-001772	Ailuropoda melanoleuca	22.41	1.00e-24	106.00
IUUC-Atr-003057	Amborella trichopoda	21.44	9.00e-19	87.00
IUUC-Apl-004225	Anas platyrhynchos	23.11	7.00e-19	87.00
IUUC-Aca-004528	Anolis carolinensis	21.95	2.00e-26	112.00
IUUC-Aly-005971	Arabidopsis lyrata	24.04	2.00e-17	82.80
IUUC-Ath-007216	Arabidopsis thaliana	22.88	2.00e-17	82.40
IUUC-Afu-009094	Aspergillus fumigatus	30.48	1.00e-33	135.00
IUUC-Ani-009273	Aspergillus nidulans	27.61	1.00e-40	159.00
IUUC-Ate-010477	Aspergillus terreus	27.71	6.00e-33	134.00
IUUC-Ame-011596	Astyanax mexicanus	22.80	4.00e-24	104.00
IUUC-Bta-013087	Bos taurus	22.87	3.00e-28	118.00
IUUC-Bdi-014281	Brachypodium distachyon	23.54	8.00e-18	84.00
IUUC-Bol-015950	Brassica oleracea	21.48	9.00e-18	83.60
IUUC-Bra-016891	Brassica rapa	20.94	2.00e-17	82.80
IUUC-Cja-019291	Callithrix jacchus	22.77	2.00e-22	99.00
IUUC-Cfa-020826	Canis familiaris	21.84	2.00e-24	105.00
IUUC-Cpo-022075	Cavia porcellus	22.30	2.00e-28	119.00
IUUC-Csa-023922	Chlorocebus sabaeus	22.13	2.00e-27	115.00
IUUC-Cho-025070	Choloepus hoffmanni	22.78	1.00e-19	89.70
IUUC-Cin-025661	Ciona intestinalis	21.14	9.00e-16	76.60
IUUC-Cgl-026473	Colletotrichum gloeosporioides	23.11	2.00e-31	129.00
IUUC-Cne-026862	Cryptococcus neoformans	21.59	3.00e-15	75.90
IUUC-Cme-027187	Cyanidioschyzon merolae	37.80	2.00e-08	53.10
IUUC-Dre-028194	Danio rerio	22.46	1.00e-29	122.00
IUUC-Dno-029393	Dasypus novemcinctus	21.81	1.00e-19	90.10
IUUC-Dor-030476	Dipodomys ordii	25.66	1.00e-20	93.20
IUUC-Dse-031561	Dothistroma septosporum	27.25	2.00e-31	129.00
IUUC-Dme-031625	Drosophila melanogaster	24.06	3.00e-18	85.90
IUUC-Ete-033185	Echinops telfairi	22.66	6.00e-23	100.00
IUUC-Eca-034192	Equus caballus	21.76	1.00e-25	109.00
IUUC-Fca-036473	Felis catus	22.93	3.00e-27	115.00
IUUC-Fal-037083	Ficedula albicollis	23.75	2.00e-19	89.00
IUUC-Fox-037801	Fusarium oxysporum	22.39	5.00e-35	141.00
IUUC-Fso-038117	Fusarium solani	22.48	2.00e-35	142.00
IUUC-Gmo-038612	Gadus morhua	22.32	8.00e-27	113.00
IUUC-Ggr-040067	Gaeumannomyces graminis	24.24	1.00e-28	120.00
IUUC-Gga-040173	Gallus gallus	25.29	1.00e-17	82.00
IUUC-Gac-042628	Gasterosteus aculeatus	22.66	5.00e-29	121.00
IUUC-Gma-043929	Glycine max	22.26	7.00e-16	77.40
IUUC-Ggo-044723	Gorilla gorilla	21.35	3.00e-26	111.00
IUUC-Hsa-045976	Homo sapiens	22.21	4.00e-27	114.00
IUUC-Itr-048873	Ictidomys tridecemlineatus	22.69	2.00e-26	112.00
IUUC-Lch-049534	Latimeria chalumnae	21.93	1.00e-29	123.00
IUUC-Lpe-050961	Leersia perrieri	23.12	3.00e-17	82.00
IUUC-Loc-052545	Lepisosteus oculatus	21.34	6.00e-21	94.40
IUUC-Laf-053408	Loxodonta africana	21.50	6.00e-27	114.00
IUUC-Mcc-055400	Macaca mulatta	22.08	3.00e-27	115.00
IUUC-Meu-056448	Macropus eugenii	27.05	1.00e-18	86.30
IUUC-Mor-057047	Magnaporthe oryzae	23.39	6.00e-23	101.00
IUUC-Mpo-057552	Magnaporthe poae	28.06	5.00e-23	101.00
IUUC-Mtr-058588	Medicago truncatula	22.02	1.00e-17	83.20
IUUC-Mla-059102	Melampsora laricipopulina	24.13	4.00e-14	71.60
IUUC-Mga-059364	Meleagris gallopavo	23.16	4.00e-21	94.70
IUUC-Mvi-060387	Microbotryum violaceum	29.07	5.00e-31	127.00
IUUC-Mmr-061240	Microcebus murinus	21.77	9.00e-26	110.00
IUUC-Mdo-062461	Monodelphis domestica	22.66	1.00e-29	123.00
IUUC-Mmu-063820	Mus musculus	22.83	4.00e-26	111.00
IUUC-Mac-064657	Musa acuminata	22.74	6.00e-14	70.90
IUUC-Mpu-066642	Mustela putorius furo	21.94	2.00e-23	102.00
IUUC-Mlu-067113	Myotis lucifugus	21.39	2.00e-16	79.00
IUUC-Ncr-068881	Neurospora crassa	25.86	2.00e-34	139.00
IUUC-Nle-069700	Nomascus leucogenys	22.49	3.00e-28	118.00
IUUC-Opr-070788	Ochotona princeps	23.41	2.00e-21	95.90
IUUC-Ont-071934	Oreochromis niloticus	23.63	9.00e-33	133.00
IUUC-Ocu-074934	Oryctolagus cuniculus	21.85	2.00e-25	108.00
IUUC-Oba-075556	Oryza barthii	23.23	9.00e-18	83.60
IUUC-Obr-076321	Oryza brachyantha	23.21	1.00e-18	86.70
IUUC-Ogl-077721	Oryza glaberrima	23.23	1.00e-17	83.20
IUUC-Ogu-078969	Oryza glumaepatula	23.23	1.00e-17	83.60
IUUC-Oin-079774	Oryza indica	23.23	1.00e-17	83.20
IUUC-Ome-081288	Oryza meridionalis	23.23	1.00e-17	83.20
IUUC-Oni-082679	Oryza nivara	23.23	1.00e-17	83.20
IUUC-Opu-083382	Oryza punctata	23.57	2.00e-17	82.40
IUUC-Oru-085008	Oryza rufipogon	23.57	1.00e-17	83.20
IUUC-Osa-086286	Oryza sativa	23.57	1.00e-17	83.20
IUUC-Ola-087159	Oryzias latipes	22.03	2.00e-25	108.00
IUUC-Olu-087737	Ostreococcus lucimarinus	24.27	2.00e-15	76.30
IUUC-Oga-087932	Otolemur garnettii	22.40	3.00e-24	105.00
IUUC-Oar-090087	Ovis aries	22.99	3.00e-28	118.00
IUUC-Ptr-090836	Pan troglodytes	22.48	5.00e-27	114.00
IUUC-Pan-091703	Papio anubis	22.14	4.00e-24	104.00
IUUC-Psi-093289	Pelodiscus sinensis	22.33	3.00e-24	105.00
IUUC-Pma-094549	Petromyzon marinus	35.23	2.00e-09	55.80
IUUC-Ppa-095363	Physcomitrella patens	30.22	8.00e-24	103.00
IUUC-Pfo-096805	Poecilia formosa	23.69	3.00e-31	128.00
IUUC-Pab-098646	Pongo abelii	22.21	4.00e-27	114.00
IUUC-Pop-099325	Populus trichocarpa	23.18	2.00e-17	82.40
IUUC-Pca-100866	Procavia capensis	21.52	3.00e-23	102.00
IUUC-Ppe-101421	Prunus persica	22.30	2.00e-12	65.50
IUUC-Pva-103237	Pteropus vampyrus	41.56	2.00e-11	62.40
IUUC-Pgr-103514	Puccinia graminis	28.47	2.00e-16	79.70
IUUC-Pte-104266	Pyrenophora teres	23.07	4.00e-32	131.00
IUUC-Pyt-104657	Pyrenophora triticirepentis	22.51	1.00e-29	123.00
IUUC-Rno-105785	Rattus norvegicus	23.71	4.00e-23	101.00
IUUC-Sha-107623	Sarcophilus harrisii	23.04	1.00e-29	122.00
IUUC-Sja-107756	Schizosaccharomyces japonicus	38.87	7.00e-138	482.00
IUUC-Smo-108802	Selaginella moellendorffii	23.39	2.00e-18	85.90
IUUC-Sit-110013	Setaria italica	22.62	5.00e-20	90.90
IUUC-Sly-111872	Solanum lycopersicum	23.93	5.00e-14	71.20
IUUC-Sbi-114792	Sorghum bicolor	21.39	2.00e-15	75.90
IUUC-Sre-114923	Sporisorium reilianum	25.90	2.00e-26	113.00
IUUC-Ssc-115517	Sus scrofa	23.26	4.00e-29	121.00
IUUC-Tgu-116868	Taeniopygia guttata	21.92	3.00e-20	91.70
IUUC-Tru-118503	Takifugu rubripes	22.99	1.00e-24	106.00
IUUC-Tsy-119349	Tarsius syrichta	23.15	2.00e-29	122.00
IUUC-Tni-120437	Tetraodon nigroviridis	22.85	3.00e-23	102.00
IUUC-Tca-121127	Theobroma cacao	25.34	2.00e-17	82.40
IUUC-Tvi-122323	Trichoderma virens	23.88	1.00e-30	126.00
IUUC-Tae-124130	Triticum aestivum	24.57	6.00e-14	70.90
IUUC-Tme-127167	Tuber melanosporum	24.91	5.00e-34	137.00
IUUC-Ttr-128949	Tursiops truncatus	22.68	1.00e-20	93.20
IUUC-Uma-129522	Ustilago maydis	28.04	4.00e-29	121.00
IUUC-Vda-129794	Verticillium dahliae	27.89	6.00e-21	94.40
IUUC-Vpa-130282	Vicugna pacos	22.78	1.00e-22	99.80
IUUC-Xtr-132078	Xenopus tropicalis	24.14	8.00e-18	84.00
IUUC-Xma-133958	Xiphophorus maculatus	23.95	3.00e-30	125.00
IUUC-Zma-135807	Zea mays	22.55	2.00e-17	82.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence