iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111768

Ensembl Protein ID

Solyc08g067770.2.1

UniProt Accession

K4CM01; K4CM01_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g067770.2	Solyc08g067770.2.1	Solyc08g067770.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.6	356	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC H+fh+dC+ kw       + + +CPlC+
   Q: 356  CCICLAKYvnNDELRELPCSHFFHKDCVDKW------LKINNSCPLCK 397
           ******9999666******************......**********7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAISSLGLHR KSQTNQFQLL MEQADNRSND EHVIDITSSN DASSSSNPHD RPVNNVLHVQ 60
AEHPPSTSTT VPVSQHAFSS ASRSNLRNSS FARRGSGRRH RSPLNSVLWI SIELVLTLSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAAACCTG CTTAGACTTC TCATATATAG CTGCTGCAGT CTCTGAATTT ACTGGGTGAT 60
TGTGAAGAGG AGAAGAATTT TTCATCTGGT GAACTCATAC TTCACTGCTT AAGACTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101251310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005824	Arabidopsis lyrata	61.35	4.00e-111	394.00
IUUC-Ath-007421	Arabidopsis thaliana	61.11	1.00e-111	395.00
IUUC-Bdi-014783	Brachypodium distachyon	57.02	5.00e-101	360.00
IUUC-Bol-015448	Brassica oleracea	71.24	9.00e-110	389.00
IUUC-Bra-017950	Brassica rapa	70.86	8.00e-108	382.00
IUUC-Dme-031973	Drosophila melanogaster	36.73	6.00e-13	69.70
IUUC-Lpe-051028	Leersia perrieri	52.84	2.00e-78	285.00
IUUC-Mtr-058402	Medicago truncatula	59.70	2.00e-100	358.00
IUUC-Mac-065469	Musa acuminata	55.00	1.00e-108	385.00
IUUC-Oba-075086	Oryza barthii	52.43	1.00e-80	292.00
IUUC-Ogl-077290	Oryza glaberrima	52.43	1.00e-80	292.00
IUUC-Ogu-078966	Oryza glumaepatula	52.43	3.00e-80	291.00
IUUC-Oin-079535	Oryza indica	52.43	2.00e-80	292.00
IUUC-Olo-080967	Oryza longistaminata	52.43	2.00e-80	293.00
IUUC-Ome-081533	Oryza meridionalis	52.17	3.00e-78	285.00
IUUC-Oni-082670	Oryza nivara	52.17	6.00e-80	290.00
IUUC-Oru-084956	Oryza rufipogon	52.17	2.00e-80	291.00
IUUC-Osa-085907	Oryza sativa	52.43	2.00e-80	292.00
IUUC-Ppa-095745	Physcomitrella patens	59.09	8.00e-83	300.00
IUUC-Pop-099755	Populus trichocarpa	64.62	3.00e-130	457.00
IUUC-Ppe-102005	Prunus persica	67.22	1.00e-134	472.00
IUUC-Ptt-103787	Puccinia triticina	50.00	8.00e-12	63.20
IUUC-Smo-108799	Selaginella moellendorffii	60.58	9.00e-89	319.00
IUUC-Sit-109918	Setaria italica	55.19	1.00e-103	368.00
IUUC-Stu-112684	Solanum tuberosum	97.01	4.00e-162	563.00
IUUC-Sbi-113823	Sorghum bicolor	53.88	4.00e-106	377.00
IUUC-Tca-121104	Theobroma cacao	65.53	3.00e-134	471.00
IUUC-Tae-123033	Triticum aestivum	63.67	4.00e-81	294.00
IUUC-Tur-126522	Triticum urartu	64.00	5.00e-81	294.00
IUUC-Vvi-131276	Vitis vinifera	58.64	4.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence