iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131601

UUCD1 version

UUC-ViV-00113

Ensembl Protein ID

VIT_04s0008g04280.t01

UniProt Accession

D7SUI3; D7SUI3_VITVI

Genbank Protein ID

CBI20932.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

VIT_04s0008g04280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g04280	VIT_04s0008g04280.t01	VIT_04s0008g04280.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-07	32.0	343	384

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC H+fh++C+ kw       + +++CPlC+
   Q: 343  CCICLAKYanNDELRELPCSHFFHKECVDKW------LKINALCPLCK 384
           ********98666******************......**********7 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEQPGNQIDT EHIIDITRSG DASSSNSSND GPSTSLDQLQ HDDRPASSAR VPISQPSFSS 60
SNVSNSRNSF RRRADARRRR SPLNSGLWIS IELALTVSQI IASVVVLSLS RHEHPHAPLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCTCTAA AGTTGACGCC ATTTGCCTAA AAAAAAATCC CCAAAAATAA AAAAATCCAA 60
AAAAATTATT ACAAAAAAGC ACTGAATAAA ATCAGAACTA CAGACTACGG AACCTCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005824	Arabidopsis lyrata	76.07	5.00e-123	433.00
IUUC-Ath-007421	Arabidopsis thaliana	76.47	8.00e-124	436.00
IUUC-Bol-015448	Brassica oleracea	75.57	2.00e-125	441.00
IUUC-Bra-017950	Brassica rapa	75.00	5.00e-123	433.00
IUUC-Mtr-058402	Medicago truncatula	63.09	4.00e-114	404.00
IUUC-Ppa-095745	Physcomitrella patens	59.81	3.00e-87	314.00
IUUC-Pop-099755	Populus trichocarpa	73.33	3.00e-148	517.00
IUUC-Ppe-102005	Prunus persica	72.70	7.00e-140	489.00
IUUC-Smo-108799	Selaginella moellendorffii	62.94	6.00e-96	343.00
IUUC-Stu-112684	Solanum tuberosum	66.58	2.00e-118	417.00
IUUC-Tca-121104	Theobroma cacao	76.30	1.00e-150	525.00
IUUC-Tae-124640	Triticum aestivum	63.19	3.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence