iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109627

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377582

Gene Name

SELMODRAFT_172230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_172230	EFJ27256	EFJ27256

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-32	111.3	10	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelMrdPv++++G+tydrssI kwl++g+  cP t+qpl ++++lvPn++lr+li++wce++s 
   Q: 10   PPPEFICPISLELMRDPVTACTGVTYDRSSINKWLERGQDCCPATMQPLhQNHSLVPNNALRSLIHQWCESHST 83
           699**********************************************889999****************985 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MDQTDLHPVP PPEFICPISL ELMRDPVTAC TGVTYDRSSI NKWLERGQDC CPATMQPLHQ 60
NHSLVPNNAL RSLIHQWCES HSTTSDLFRS STSPIDRPHI LLLLDRIQRD PANVDALSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAAA CCGATCTTCA TCCAGTGCCT CCACCCGAAT TTATCTGCCC AATTTCTCTG 60
GAACTAATGC GGGATCCCGT AACCGCTTGC ACAGGCGTGA CATACGATCG GAGCAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_172230

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence