iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113911

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G503500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g047040	Sb01g047040.1	Sb01g047040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.50e-33	114.8	11	141

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 8    elekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspalsvesvl 102
           +l+k  ++ +++++v++  ++e+ v++ Gp++++Y+ggv+++++e+p+ YP+k+P++ f++ki+hPnv+e  G+vCl++++  ++Wsp+ ++ +v+
   Q: 11   DLMKLMMSDYKVEMVND-GMQEFFVEFRGPNESIYQGGVWRVRVELPDAYPYKSPSIGFINKIYHPNVDEMsGSVCLDVIN--QTWSPMFDLVNVF 103
           5667778899999***9.8***************************************************99********9..************* PP
   S: 103  .lsiqsllaepnpesplneeaaellkknreeykkkvre 139
            + + +ll  pnp++pln +aa l+ ++r +y++kv+e
   Q: 104  eVFLPQLLLYPNPSDPLNGDAAALMMRDRPAYEQKVKE 141
           889********************************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSPSKRREM DLMKLMMSDY KVEMVNDGMQ EFFVEFRGPN ESIYQGGVWR VRVELPDAYP 60
YKSPSIGFIN KIYHPNVDEM SGSVCLDVIN QTWSPMFDLV NVFEVFLPQL LLYPNPSDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCCCATCG TAATAAAAAT AAAATCAATA ATAGAGAGAG AGAGGAGGTA GCAACAGCGG 60
TTGCTTAATC CTTTCCTTTT CCTCCTCTTA TCTCCAGGGC ATCCCAAGAG GCGGAAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g047040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001260	Ailuropoda melanoleuca	61.76	2.00e-47	180.00
IUUC-Atr-002681	Amborella trichopoda	87.18	2.00e-80	290.00
IUUC-Apl-003547	Anas platyrhynchos	64.60	1.00e-43	167.00
IUUC-Aca-005224	Anolis carolinensis	64.66	4.00e-43	166.00
IUUC-Ago-007727	Ashbya gossypii	60.00	1.00e-52	198.00
IUUC-Ani-009294	Aspergillus nidulans	57.30	3.00e-57	213.00
IUUC-Bta-012802	Bos taurus	61.76	2.00e-47	180.00
IUUC-Cel-018412	Caenorhabditis elegans	52.38	4.00e-48	183.00
IUUC-Cja-019571	Callithrix jacchus	46.48	5.00e-33	132.00
IUUC-Cfa-020811	Canis familiaris	61.76	2.00e-47	180.00
IUUC-Cpo-021889	Cavia porcellus	64.66	1.00e-43	168.00
IUUC-Cre-022956	Chlamydomonas reinhardtii	65.92	5.00e-67	246.00
IUUC-Csa-023289	Chlorocebus sabaeus	61.76	2.00e-47	180.00
IUUC-Cho-024517	Choloepus hoffmanni	41.18	2.00e-22	97.80
IUUC-Dre-027450	Danio rerio	61.76	2.00e-47	181.00
IUUC-Dno-029838	Dasypus novemcinctus	61.76	2.00e-47	180.00
IUUC-Dor-031119	Dipodomys ordii	61.76	2.00e-47	180.00
IUUC-Eca-034123	Equus caballus	62.40	2.00e-45	174.00
IUUC-Fca-035502	Felis catus	61.76	2.00e-47	180.00
IUUC-Fal-037054	Ficedula albicollis	64.66	2.00e-43	167.00
IUUC-Gmo-038858	Gadus morhua	58.82	2.00e-51	193.00
IUUC-Ggr-039749	Gaeumannomyces graminis	59.26	7.00e-54	202.00
IUUC-Gga-040942	Gallus gallus	61.76	2.00e-47	180.00
IUUC-Gac-042079	Gasterosteus aculeatus	60.13	2.00e-53	200.00
IUUC-Gma-044272	Glycine max	87.43	5.00e-84	302.00
IUUC-Hsa-046545	Homo sapiens	61.76	2.00e-47	180.00
IUUC-Hvu-047260	Hordeum vulgare	82.61	2.00e-81	293.00
IUUC-Itr-048474	Ictidomys tridecemlineatus	61.76	2.00e-47	180.00
IUUC-Kpa-049144	Komagataella pastoris	74.42	5.00e-57	212.00
IUUC-Lch-050589	Latimeria chalumnae	61.36	4.00e-45	172.00
IUUC-Loc-052829	Lepisosteus oculatus	61.76	4.00e-47	179.00
IUUC-Laf-053526	Loxodonta africana	62.50	4.00e-47	179.00
IUUC-Mcc-055611	Macaca mulatta	61.76	2.00e-47	180.00
IUUC-Mpo-057484	Magnaporthe poae	61.70	9.00e-50	188.00
IUUC-Mla-058926	Melampsora laricipopulina	71.43	2.00e-64	237.00
IUUC-Mga-059801	Meleagris gallopavo	61.76	2.00e-47	180.00
IUUC-Mmr-061205	Microcebus murinus	61.76	2.00e-47	180.00
IUUC-Mdo-062038	Monodelphis domestica	70.77	1.00e-25	107.00
IUUC-Mmu-063974	Mus musculus	61.76	2.00e-47	180.00
IUUC-Mac-065395	Musa acuminata	91.26	8.00e-87	311.00
IUUC-Mpu-066759	Mustela putorius furo	61.76	2.00e-47	180.00
IUUC-Mlu-067674	Myotis lucifugus	64.66	1.00e-43	168.00
IUUC-Nle-069926	Nomascus leucogenys	61.76	2.00e-47	180.00
IUUC-Opr-070598	Ochotona princeps	61.76	2.00e-47	180.00
IUUC-Ont-071893	Oreochromis niloticus	59.48	2.00e-52	196.00
IUUC-Oan-073273	Ornithorhynchus anatinus	64.66	1.00e-43	168.00
IUUC-Ocu-074357	Oryctolagus cuniculus	61.76	4.00e-47	179.00
IUUC-Ola-087423	Oryzias latipes	59.48	2.00e-52	196.00
IUUC-Oga-088412	Otolemur garnettii	61.76	2.00e-47	180.00
IUUC-Oar-090282	Ovis aries	64.66	1.00e-43	167.00
IUUC-Ptr-090470	Pan troglodytes	61.76	2.00e-47	180.00
IUUC-Pan-092552	Papio anubis	61.76	2.00e-47	180.00
IUUC-Psi-093516	Pelodiscus sinensis	60.66	9.00e-44	168.00
IUUC-Pfo-097374	Poecilia formosa	61.76	2.00e-47	181.00
IUUC-Pab-098112	Pongo abelii	61.76	2.00e-47	180.00
IUUC-Pop-099367	Populus trichocarpa	86.34	2.00e-83	300.00
IUUC-Pca-100436	Procavia capensis	47.55	6.00e-34	135.00
IUUC-Pva-102776	Pteropus vampyrus	62.50	5.00e-47	179.00
IUUC-Rno-105699	Rattus norvegicus	61.03	7.00e-47	178.00
IUUC-Sha-106524	Sarcophilus harrisii	64.66	1.00e-43	167.00
IUUC-Smo-108956	Selaginella moellendorffii	77.60	9.00e-83	298.00
IUUC-Sit-109856	Setaria italica	97.27	3.00e-92	330.00
IUUC-Sly-111921	Solanum lycopersicum	87.98	4.00e-83	299.00
IUUC-Sar-113572	Sorex araneus	44.83	4.00e-22	96.30
IUUC-Ssc-116221	Sus scrofa	61.60	2.00e-43	167.00
IUUC-Tgu-116965	Taeniopygia guttata	64.66	1.00e-43	167.00
IUUC-Tru-118743	Takifugu rubripes	59.48	2.00e-52	197.00
IUUC-Tni-120422	Tetraodon nigroviridis	61.03	8.00e-47	178.00
IUUC-Tbe-128053	Tupaia belangeri	48.28	2.00e-27	113.00
IUUC-Ttr-128734	Tursiops truncatus	61.76	2.00e-47	180.00
IUUC-Vpa-130729	Vicugna pacos	64.66	1.00e-43	167.00
IUUC-Vvi-131712	Vitis vinifera	86.34	6.00e-86	308.00
IUUC-Xtr-132368	Xenopus tropicalis	61.76	2.00e-47	181.00
IUUC-Xma-133864	Xiphophorus maculatus	61.76	2.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence