iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114718

Ensembl Protein ID

Sb07g026250.1

UniProt Accession

A0A1B6PIM1; A0A1B6PIM1_SORBI

Genbank Protein ID

KXG25536.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G193900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g026250	Sb07g026250.1	Sb07g026250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-24	84.8	803	831

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWDlr 31
           +v++ ++  +++ lv+ s+Dg++ +WD++
   Q: 803  GVNATQWlhNEPVLVTVSGDGSVGMWDVT 831
           59******655****************97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPEPQAILPL RALPPDAPLP FPVPAPFHPQ TPGPGPGPGG TAPATPPNPT PLQPQTPAAP 60
PSSSSTRPPH PWEIAARAWL ESFPDGRPPT EPEVDAYIDV HRPELPSLPR SQLHQRLLAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACATTTCTC TCGAGCTGTC AAGCACACCC GCACAGGCGC ACAGCACAAG CAAACCCCCC 60
AAAACCCACC AGGGCACCAG GCTCCGACGC ACCTCCGCCG CCGCGAATGC CGGAGCCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000846	Aegilops tauschii	75.98	0.00e+00	1015.00
IUUC-Atr-002668	Amborella trichopoda	50.36	0.00e+00	731.00
IUUC-Bdi-014501	Brachypodium distachyon	84.06	0.00e+00	1365.00
IUUC-Lpe-051545	Leersia perrieri	73.57	0.00e+00	1160.00
IUUC-Mac-064887	Musa acuminata	75.09	2.00e-127	447.00
IUUC-Oba-074978	Oryza barthii	78.86	0.00e+00	874.00
IUUC-Obr-076372	Oryza brachyantha	81.28	0.00e+00	1164.00
IUUC-Ogl-076950	Oryza glaberrima	82.73	0.00e+00	1343.00
IUUC-Ogu-078500	Oryza glumaepatula	73.85	0.00e+00	1046.00
IUUC-Oin-079488	Oryza indica	76.43	0.00e+00	872.00
IUUC-Olo-080491	Oryza longistaminata	72.45	0.00e+00	936.00
IUUC-Oni-082022	Oryza nivara	73.85	0.00e+00	1043.00
IUUC-Opu-083211	Oryza punctata	81.49	0.00e+00	1320.00
IUUC-Oru-085018	Oryza rufipogon	71.43	0.00e+00	862.00
IUUC-Osa-085998	Oryza sativa	82.73	0.00e+00	1344.00
IUUC-Ppa-095605	Physcomitrella patens	48.15	2.00e-139	488.00
IUUC-Sja-107870	Schizosaccharomyces japonicus	23.32	2.00e-14	73.60
IUUC-Spo-108270	Schizosaccharomyces pombe	22.81	5.00e-10	58.90
IUUC-Smo-109202	Selaginella moellendorffii	52.94	4.00e-141	493.00
IUUC-Sit-110580	Setaria italica	89.52	0.00e+00	1365.00
IUUC-Tae-125757	Triticum aestivum	80.31	0.00e+00	1300.00
IUUC-Tur-126661	Triticum urartu	82.62	0.00e+00	801.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence