iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111979

Ensembl Protein ID

PGSC0003DMT400019235

UniProt Accession

M1ABT1; M1ABT1_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400007435	PGSC0003DMT400019235	PGSC0003DMT400019235

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-34	117.3	245	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+I+kwl+ g+ktcP+t+q+l ++ l+Pn++l++li  wce n++
   Q: 245  IPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGV 317
           89*******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGHQKEDLIN ELTELIDGVS GLPECRSVSK RMYSNLVRRV KLLSPLVEDL KDSDGVEVGD 60
DVVHGLELLR IALISGLELL KSVNEGSKIL QALQIENISS RFLNVTEQIE DALSDIPYNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCAACAAA TCAATTTTTT CCATTTCATC TTTGCTTCAC CTGCTTAGTT TCCTTGTGTG 60
AACATACAAG AGAGCTTTGA ATTTTCTCTC TTTTGATTCT CAAAATTCAT CAATTCTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102600882

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	68.77	0.00e+00	809.00
IUUC-Aly-006103	Arabidopsis lyrata	67.79	0.00e+00	780.00
IUUC-Ath-006994	Arabidopsis thaliana	67.62	0.00e+00	778.00
IUUC-Bdi-014691	Brachypodium distachyon	65.31	0.00e+00	700.00
IUUC-Bol-016160	Brassica oleracea	64.86	0.00e+00	770.00
IUUC-Bra-016727	Brassica rapa	65.16	0.00e+00	767.00
IUUC-Gma-043634	Glycine max	72.01	0.00e+00	885.00
IUUC-Hvu-047272	Hordeum vulgare	65.25	0.00e+00	669.00
IUUC-Lpe-051517	Leersia perrieri	64.98	0.00e+00	675.00
IUUC-Mtr-057651	Medicago truncatula	72.61	0.00e+00	862.00
IUUC-Mac-065604	Musa acuminata	58.74	0.00e+00	645.00
IUUC-Oba-075750	Oryza barthii	64.18	0.00e+00	684.00
IUUC-Obr-076793	Oryza brachyantha	64.55	0.00e+00	662.00
IUUC-Ogl-077380	Oryza glaberrima	64.37	0.00e+00	685.00
IUUC-Ogu-078219	Oryza glumaepatula	63.99	0.00e+00	682.00
IUUC-Oin-079724	Oryza indica	60.60	0.00e+00	699.00
IUUC-Ome-081932	Oryza meridionalis	63.99	0.00e+00	683.00
IUUC-Oni-082439	Oryza nivara	64.37	0.00e+00	684.00
IUUC-Opu-083837	Oryza punctata	60.43	0.00e+00	700.00
IUUC-Oru-085172	Oryza rufipogon	64.18	0.00e+00	683.00
IUUC-Osa-085991	Oryza sativa	64.18	0.00e+00	684.00
IUUC-Pop-099229	Populus trichocarpa	74.56	0.00e+00	910.00
IUUC-Ppe-101965	Prunus persica	70.67	0.00e+00	847.00
IUUC-Smo-109340	Selaginella moellendorffii	56.69	4.00e-167	580.00
IUUC-Sit-110461	Setaria italica	67.01	0.00e+00	661.00
IUUC-Sly-111662	Solanum lycopersicum	97.76	0.00e+00	1167.00
IUUC-Sbi-114550	Sorghum bicolor	60.63	0.00e+00	689.00
IUUC-Tca-121269	Theobroma cacao	75.65	0.00e+00	917.00
IUUC-Tae-124061	Triticum aestivum	64.19	0.00e+00	676.00
IUUC-Tur-126276	Triticum urartu	62.36	0.00e+00	631.00
IUUC-Vvi-131729	Vitis vinifera	76.86	0.00e+00	920.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence