iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116602

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01002318

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000010493.1	ENSTGUT00000010937.1	ENSTGUP00000010824.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-12	46.9	261	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ +vt ++f  ++ ++++++s D t+k+WDlr 
   Q: 261  HKKKVTHVEFnsQCeWMFATASVDQTVKIWDLRN 294
           8899******97447****************985 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MAPVNQPKDK KRERACQHWP EEAKSAGKRK RDYGERGNEK QEKKLFVRKT SRPSGKIGCS 60
GGGFVMRNKR VLSSQLERRC SIVHYVYQKM LGGSMQAQLR QRLELAFVRS LSSYCLFRRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCAG TGAACCAGCC AAAGGACAAG AAACGTGAGA GGGCATGTCA GCATTGGCCA 60
GAAGAAGCAA AATCAGCTGG GAAGAGGAAA CGGGACTATG GAGAACGAGG GAATGAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	32.42	3.00e-34	139.00
IUUC-Aml-002203	Ailuropoda melanoleuca	59.25	8.00e-131	459.00
IUUC-Atr-002957	Amborella trichopoda	34.02	2.00e-40	160.00
IUUC-Apl-003832	Anas platyrhynchos	85.34	0.00e+00	793.00
IUUC-Aca-004358	Anolis carolinensis	72.71	0.00e+00	700.00
IUUC-Aly-006296	Arabidopsis lyrata	33.33	4.00e-42	165.00
IUUC-Ath-007115	Arabidopsis thaliana	32.66	4.00e-43	169.00
IUUC-Ame-010817	Astyanax mexicanus	57.84	1.00e-132	466.00
IUUC-Bgr-012236	Blumeria graminis	23.80	3.00e-14	72.80
IUUC-Bta-012914	Bos taurus	51.45	2.00e-129	455.00
IUUC-Bdi-014261	Brachypodium distachyon	32.73	3.00e-34	139.00
IUUC-Bol-015317	Brassica oleracea	30.41	7.00e-43	167.00
IUUC-Bra-016848	Brassica rapa	33.54	2.00e-42	166.00
IUUC-Cja-018967	Callithrix jacchus	57.88	9.00e-129	452.00
IUUC-Cfa-021238	Canis familiaris	58.82	2.00e-123	435.00
IUUC-Cpo-022063	Cavia porcellus	58.40	2.00e-127	448.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	23.87	5.00e-07	49.30
IUUC-Csa-023382	Chlorocebus sabaeus	52.55	5.00e-130	457.00
IUUC-Cho-024805	Choloepus hoffmanni	43.22	3.00e-49	187.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	24.73	2.00e-16	79.70
IUUC-Dre-028732	Danio rerio	63.29	2.00e-142	498.00
IUUC-Dor-030461	Dipodomys ordii	66.81	7.00e-94	337.00
IUUC-Ete-033038	Echinops telfairi	49.22	5.00e-123	434.00
IUUC-Eca-033772	Equus caballus	58.89	1.00e-124	439.00
IUUC-Eeu-034662	Erinaceus europaeus	48.65	6.00e-30	124.00
IUUC-Fca-036095	Felis catus	59.67	1.00e-124	439.00
IUUC-Fso-038198	Fusarium solani	26.58	1.00e-13	70.90
IUUC-Gmo-039683	Gadus morhua	61.67	5.00e-137	480.00
IUUC-Gga-040530	Gallus gallus	85.56	0.00e+00	788.00
IUUC-Gac-041517	Gasterosteus aculeatus	62.74	5.00e-134	470.00
IUUC-Gma-043378	Glycine max	32.11	7.00e-43	167.00
IUUC-Ggo-045364	Gorilla gorilla	58.97	4.00e-130	457.00
IUUC-Hsa-046354	Homo sapiens	58.97	5.00e-130	457.00
IUUC-Hvu-047151	Hordeum vulgare	30.66	1.00e-27	116.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	53.65	4.00e-130	457.00
IUUC-Lpe-051256	Leersia perrieri	32.06	4.00e-35	142.00
IUUC-Loc-052398	Lepisosteus oculatus	62.17	1.00e-141	495.00
IUUC-Laf-053562	Loxodonta africana	53.86	5.00e-128	450.00
IUUC-Mcc-055197	Macaca mulatta	59.79	8.00e-103	366.00
IUUC-Meu-056151	Macropus eugenii	60.42	2.00e-102	364.00
IUUC-Mtr-057940	Medicago truncatula	33.04	4.00e-41	162.00
IUUC-Mga-059923	Meleagris gallopavo	83.59	0.00e+00	796.00
IUUC-Mmr-061465	Microcebus murinus	61.70	1.00e-103	369.00
IUUC-Mdo-063063	Monodelphis domestica	63.25	1.00e-141	495.00
IUUC-Mmu-064294	Mus musculus	58.22	4.00e-128	450.00
IUUC-Mac-065598	Musa acuminata	32.75	5.00e-36	145.00
IUUC-Mpu-066831	Mustela putorius furo	54.12	3.00e-127	447.00
IUUC-Mlu-067222	Myotis lucifugus	52.24	4.00e-128	450.00
IUUC-Nle-069581	Nomascus leucogenys	52.33	5.00e-130	457.00
IUUC-Opr-070644	Ochotona princeps	57.73	7.00e-125	440.00
IUUC-Ont-072605	Oreochromis niloticus	59.08	3.00e-130	457.00
IUUC-Oan-072973	Ornithorhynchus anatinus	67.23	3.00e-141	493.00
IUUC-Ocu-074615	Oryctolagus cuniculus	51.54	4.00e-129	454.00
IUUC-Oba-075283	Oryza barthii	32.23	1.00e-34	140.00
IUUC-Obr-076605	Oryza brachyantha	32.16	1.00e-36	147.00
IUUC-Ogl-077512	Oryza glaberrima	32.23	2.00e-34	140.00
IUUC-Ogu-078329	Oryza glumaepatula	32.23	1.00e-34	140.00
IUUC-Oin-079980	Oryza indica	32.23	2.00e-34	139.00
IUUC-Olo-080516	Oryza longistaminata	32.22	1.00e-34	140.00
IUUC-Ome-081415	Oryza meridionalis	32.23	3.00e-34	139.00
IUUC-Oni-082985	Oryza nivara	32.23	2.00e-34	139.00
IUUC-Opu-084159	Oryza punctata	31.03	2.00e-35	143.00
IUUC-Oru-085137	Oryza rufipogon	32.23	1.00e-34	140.00
IUUC-Osa-085614	Oryza sativa	32.23	1.00e-34	140.00
IUUC-Ola-087044	Oryzias latipes	56.91	7.00e-133	466.00
IUUC-Oga-088274	Otolemur garnettii	55.69	2.00e-132	465.00
IUUC-Oar-089826	Ovis aries	51.45	9.00e-130	456.00
IUUC-Ptr-091631	Pan troglodytes	58.97	5.00e-130	457.00
IUUC-Pan-092535	Papio anubis	52.55	6.00e-131	459.00
IUUC-Psi-093815	Pelodiscus sinensis	79.26	0.00e+00	734.00
IUUC-Pma-094474	Petromyzon marinus	53.51	1.00e-117	415.00
IUUC-Ppa-095414	Physcomitrella patens	33.73	2.00e-38	153.00
IUUC-Pfo-096559	Poecilia formosa	60.33	4.00e-136	477.00
IUUC-Pab-098528	Pongo abelii	58.70	7.00e-130	456.00
IUUC-Pop-100064	Populus trichocarpa	31.37	2.00e-40	159.00
IUUC-Pca-100803	Procavia capensis	52.55	4.00e-125	440.00
IUUC-Ppe-101966	Prunus persica	33.78	6.00e-44	171.00
IUUC-Pva-103213	Pteropus vampyrus	57.52	3.00e-124	437.00
IUUC-Ptt-103899	Puccinia triticina	21.15	1.00e-06	48.10
IUUC-Rno-105087	Rattus norvegicus	53.37	5.00e-126	443.00
IUUC-Sha-107466	Sarcophilus harrisii	61.56	6.00e-141	493.00
IUUC-Smo-108958	Selaginella moellendorffii	30.11	2.00e-35	143.00
IUUC-Sit-109968	Setaria italica	31.61	1.00e-33	137.00
IUUC-Sly-111495	Solanum lycopersicum	32.54	3.00e-38	152.00
IUUC-Sar-113272	Sorex araneus	57.51	4.00e-120	423.00
IUUC-Sbi-114706	Sorghum bicolor	29.97	3.00e-30	125.00
IUUC-Ssc-115437	Sus scrofa	51.66	1.00e-124	439.00
IUUC-Tru-118698	Takifugu rubripes	58.33	4.00e-118	417.00
IUUC-Tsy-119027	Tarsius syrichta	57.01	5.00e-109	387.00
IUUC-Tni-119787	Tetraodon nigroviridis	59.28	1.00e-130	459.00
IUUC-Tca-121447	Theobroma cacao	33.94	2.00e-41	163.00
IUUC-Tae-123253	Triticum aestivum	31.58	5.00e-35	142.00
IUUC-Tur-126724	Triticum urartu	31.58	1.00e-34	140.00
IUUC-Tme-126958	Tuber melanosporum	23.90	4.00e-10	58.90
IUUC-Tbe-127680	Tupaia belangeri	56.38	8.00e-93	333.00
IUUC-Ttr-128201	Tursiops truncatus	44.89	2.00e-100	358.00
IUUC-Vpa-130451	Vicugna pacos	74.29	1.00e-27	117.00
IUUC-Vvi-131001	Vitis vinifera	33.42	2.00e-46	179.00
IUUC-Xtr-132266	Xenopus tropicalis	59.77	7.00e-151	526.00
IUUC-Xma-133034	Xiphophorus maculatus	57.85	3.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence