iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.00e-07	31.3	374	437

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           + +pIs+   +d +v+++G+++    +++ l +    c+++++++++ +lvPn++lr+  +a  ++
   Q: 374  LSDPISGAFLEDAMVVSCGHSFGGLMLRRVL-EMS-RCTLCNTEIESGSLVPNHALRAAASAIKQQ 437
           78**************************954.444.4********************998876665 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MHRQGSSPIT PSNYNAAVSI ASDVPTGLTK SPLSHAIPVS PISAAYPSGD PILMMSGTPL 60
ARVRLSEILP YEGAPSPVYA KAVEALSVSL MRYNASVIEI GSEDTALMRC GLEAARLYFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCAATTCG AATATGTAGG TAGTTTGACC AAAAAGGTAA AATTACAAAG CCTTTAACAC 60
AAACTCAAAA CCAGAGTCTA CTACATTAGA AATTTTCACA ATTACAATTC TCCGGCGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027443--IPNS-like
IPR013083--Znf_RING/FYVE/PHD

KEGG

ath:AT3G19895

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003162	Amborella trichopoda	64.17	0.00e+00	681.00
IUUC-Aly-006466	Arabidopsis lyrata	98.19	0.00e+00	1121.00
IUUC-Bol-015151	Brassica oleracea	85.89	0.00e+00	961.00
IUUC-Bra-017698	Brassica rapa	85.15	0.00e+00	950.00
IUUC-Mtr-058666	Medicago truncatula	66.73	0.00e+00	666.00
IUUC-Pop-099410	Populus trichocarpa	68.97	0.00e+00	701.00
IUUC-Smo-108798	Selaginella moellendorffii	48.50	4.00e-108	384.00
IUUC-Vda-129797	Verticillium dahliae	41.67	1.80e+00	27.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence