iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109348

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377615

Gene Name

SELMODRAFT_34256

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_34256	EFJ17156	EFJ17156

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-21	76.4	62	101
UBD/Beta-Prp	2.40e-46	159.0	57	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           +Htd +++la  +d  l  s+s+D ++kvW +++ ++l+s
   Q: 62   QHTDTISSLASsHDgSLAFSSSWDRSVKVWKVSDLRCLQS 101
           5********988777899*******************996 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.....dls.....tgkcvhtlkgh 93
           ++l  +h++ i++++ s d+sl +++s+d+++kvw+v++  +l+s+  h+++++a+  sp+g +l tgs D ti+vw     d +      g+ +h    +
   Q: 57   TCLWLQHTDTISSLASSHDGSLAFSSSWDRSVKVWKVSDLRCLQSFRAHDDAINALVASPEG-FLYTGSADSTIRVWkkggsDRKknfalLGTLFHETLSK 156
           5667789******************************************************9.**************887663336666777777777788 PP
   S: 94   edsvlslsfsp...sgdklvsGshdrtirvwdletgqclee...............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrt 174
           +++  s+++++    g++l +G +d+ti vw+ +   ++                  l+gh+g+v c+   +   ll sGs+D tvr+W+      ++l  
   Q: 157  SARNGSTAVNAlvlGGEFLYAGLSDSTIAVWEKSLAVVVLGdrdrdhddpymscveRLRGHRGAVLCLGRAG--ELLCSGSADATVRIWSGglGGHCCLGV 255
           8888889999998667**************987777777668999999999999999********9998877..****************9666779**** PP
   S: 175  ltgghtdsvysls......fdsng..................kelvsgsldgtvklwd 208
           l+g ht++++sl                              +++ sg+ld++++ w 
   Q: 256  LKG-HTGPIKSLVvvamdpR---EknddiaeedrregdeeraFCIYSGGLDRQIRAWK 309
           *99.*********8875441...3556667777788899999***************7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

GRALFLSAHQ DNKIRVWKTN SNRSFTMKLL ATLPRARDVA RSCMFPARYV RVRRHKTCLW 60
LQHTDTISSL ASSHDGSLAF SSSWDRSVKV WKVSDLRCLQ SFRAHDDAIN ALVASPEGFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGAGCAC TCTTCCTCAG CGCTCACCAG GACAACAAGA TCCGCGTCTG GAAGACAGTC 60
GAGCTTCTCA AGATCAACGA ATTCGACTCC ATCGCCAAGA ACAGCAACAG ATCATTCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_34256

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence