iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005524

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_903152

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_9200006.1	scaffold_9200006.1	scaffold_9200006.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-05	26.6	21	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkw...p 30
           C+iCle +    +   +++ C+H +++ C+ kw    
   Q: 21   CLICLENLterrSA-AVITVCKHGYCLACIRKWrpyR 56
           ********654322.778***************5430 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKRGEKFAER VILTALREKS CLICLENLTE RRSAAVITVC KHGYCLACIR KWRPYRLKYH 60
KEHLPILRDR ETLTYHRNNP SGRRRIIRRW RDVLENSSSR SRPLPWRRSF GRPGSVPDSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCGCCGGA AGGTATTTTC TGATGAAACG CGGCGAGAAA TTTGCTGAGA GAGTAATCTT 60
AACTGCTTTA CGGGAGAAAT CGTGTCTGAT ATGCCTCGAA AATCTAACCG AGCGACGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_903152

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007668	Arabidopsis thaliana	80.62	1.00e-98	352.00
IUUC-Bol-015115	Brassica oleracea	61.89	1.00e-67	248.00
IUUC-Bra-017451	Brassica rapa	55.06	2.00e-64	238.00
IUUC-Ppa-095668	Physcomitrella patens	27.57	1.00e-13	70.10
IUUC-Pop-099119	Populus trichocarpa	43.40	2.00e-40	159.00
IUUC-Ppe-101922	Prunus persica	42.91	4.00e-42	164.00
IUUC-Smo-109039	Selaginella moellendorffii	35.26	6.00e-15	74.30
IUUC-Tca-121712	Theobroma cacao	43.43	2.00e-46	178.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence