iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005774

Ensembl Protein ID

fgenesh2_kg.1__345__AT1G04140.2

UniProt Accession

D7KDB6; D7KDB6_ARALL

Genbank Protein ID

EFH68458.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_470391

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__345__AT1G04140.2	fgenesh2_kg.1__345__AT1G04140.2	fgenesh2_kg.1__345__AT1G04140.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-10	42.1	152	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf...sdtllvsGsdDgtikvWDlrtgvllk 37
           ++f   ++ +++sGs D+ +++W+ +t  +++
   Q: 152  VRFhprHSEIVASGSLDHEVRLWNAKTAECIR 183
           55665533899*************99999987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMTESIWLHD QPSPRSMIPS PKPVANVHRQ RCRSVFKLLV QREISPKTKF VPRKRWGESR 60
WDADSSCGTT SEPVSEQGHN LISWVEAESL QYLSAKYCPL VPPPRSTIAA AFSSDGRTLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGATAATG AAGAACAGGG CATTTCAATT AGAGAGAAAA AAAGGAGATC CTTTTTAATG 60
TATCGCAGAC CATCCTCAGC TATGTCCTCC TGTTTTTCCT TTTAGGTTTC TTCGTCGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_470391

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002557	Amborella trichopoda	48.24	1.00e-109	389.00
IUUC-Ath-007656	Arabidopsis thaliana	94.96	0.00e+00	1459.00
IUUC-Ame-011354	Astyanax mexicanus	38.38	6.00e-27	116.00
IUUC-Bdi-014580	Brachypodium distachyon	57.06	4.00e-104	371.00
IUUC-Bol-016094	Brassica oleracea	82.80	0.00e+00	1203.00
IUUC-Bra-017308	Brassica rapa	84.08	0.00e+00	1259.00
IUUC-Cin-025567	Ciona intestinalis	37.93	2.00e-22	99.80
IUUC-Csv-026005	Ciona savignyi	33.77	7.00e-22	96.70
IUUC-Gmo-039343	Gadus morhua	43.92	4.00e-27	116.00
IUUC-Gac-041321	Gasterosteus aculeatus	42.57	7.00e-26	112.00
IUUC-Gma-044022	Glycine max	58.37	0.00e+00	835.00
IUUC-Hvu-047536	Hordeum vulgare	52.84	0.00e+00	717.00
IUUC-Lpe-051045	Leersia perrieri	58.50	2.00e-109	389.00
IUUC-Loc-052881	Lepisosteus oculatus	40.36	1.00e-26	115.00
IUUC-Mtr-058484	Medicago truncatula	55.43	0.00e+00	798.00
IUUC-Mmr-061037	Microcebus murinus	41.73	3.00e-23	103.00
IUUC-Mac-065308	Musa acuminata	54.27	0.00e+00	750.00
IUUC-Ont-071277	Oreochromis niloticus	43.24	1.00e-26	115.00
IUUC-Oan-073623	Ornithorhynchus anatinus	41.56	3.00e-26	113.00
IUUC-Oba-075024	Oryza barthii	65.35	4.00e-95	342.00
IUUC-Obr-076273	Oryza brachyantha	50.00	0.00e+00	660.00
IUUC-Ogl-077315	Oryza glaberrima	50.19	0.00e+00	655.00
IUUC-Ogu-078025	Oryza glumaepatula	65.35	5.00e-95	342.00
IUUC-Oni-082463	Oryza nivara	65.35	9.00e-95	341.00
IUUC-Opu-084041	Oryza punctata	65.35	2.00e-95	342.00
IUUC-Oru-085075	Oryza rufipogon	59.12	2.00e-105	376.00
IUUC-Osa-085397	Oryza sativa	50.32	0.00e+00	656.00
IUUC-Ola-086729	Oryzias latipes	43.24	1.00e-26	115.00
IUUC-Oga-089113	Otolemur garnettii	41.10	3.00e-26	114.00
IUUC-Pma-094563	Petromyzon marinus	39.76	1.00e-25	109.00
IUUC-Ppa-095890	Physcomitrella patens	66.27	2.00e-93	336.00
IUUC-Pop-099626	Populus trichocarpa	63.12	0.00e+00	897.00
IUUC-Ppe-101783	Prunus persica	59.09	0.00e+00	847.00
IUUC-Smo-109107	Selaginella moellendorffii	61.57	8.00e-85	307.00
IUUC-Sit-110786	Setaria italica	54.62	9.00e-100	357.00
IUUC-Sly-110859	Solanum lycopersicum	54.61	0.00e+00	742.00
IUUC-Stu-112031	Solanum tuberosum	55.48	0.00e+00	749.00
IUUC-Tru-118308	Takifugu rubripes	43.24	1.00e-26	115.00
IUUC-Tsy-119552	Tarsius syrichta	42.45	1.00e-23	105.00
IUUC-Tca-121568	Theobroma cacao	59.77	0.00e+00	873.00
IUUC-Tae-124768	Triticum aestivum	67.68	1.00e-98	353.00
IUUC-Tur-126480	Triticum urartu	55.84	0.00e+00	686.00
IUUC-Vpa-130741	Vicugna pacos	36.11	9.00e-26	112.00
IUUC-Vvi-131437	Vitis vinifera	57.81	0.00e+00	852.00
IUUC-Xma-134277	Xiphophorus maculatus	43.24	1.00e-26	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence