iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108757

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377599

Gene Name

SELMODRAFT_417287

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_417287	EFJ21331	EFJ21331

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-11	43.4	362	395

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sd.tllvsGsdDgtikvWD 29
           H+++vt+l++     +d  ll++Gs Dg++k+W 
   Q: 362  HESWVTALDWaagasTDqVLLATGSSDGSVKLWQ 395
           **************988999*************7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MPLCSGPPAQ AFALSATPLY PNSVRWSEDN LLAVAAGHMV TILNPASLSG PRSFVSVSVK 60
PSFDFGTVNR DELKHHLLMP LTLSRDSRAV VRSIDWSPQG VGSHGGCLLA VATTDYRVKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCTGT GCTCCGGCCC TCCAGCACAG GCTTTCGCGC TCTCCGCCAC TCCTCTCTAC 60
CCTAATTCCG TCAGGTGGTC TGAGGACAAC CTCCTTGCAG TTGCCGCTGG ACATATGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR024764--TFIIIC_Znf
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40
PF12660--zf-TFIIIC

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_417287

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	32.29	1.00e-57	217.00
IUUC-Aly-005715	Arabidopsis lyrata	29.92	3.00e-61	229.00
IUUC-Ath-007637	Arabidopsis thaliana	30.93	4.00e-99	355.00
IUUC-Bdi-014902	Brachypodium distachyon	29.97	6.00e-61	228.00
IUUC-Bol-016169	Brassica oleracea	30.00	3.00e-65	242.00
IUUC-Bra-017736	Brassica rapa	32.34	1.00e-66	247.00
IUUC-Gma-043537	Glycine max	31.69	3.00e-70	259.00
IUUC-Mtr-057870	Medicago truncatula	30.44	9.00e-66	244.00
IUUC-Mac-065235	Musa acuminata	31.03	4.00e-43	169.00
IUUC-Ogl-077286	Oryza glaberrima	29.63	1.00e-93	337.00
IUUC-Oin-079863	Oryza indica	29.20	1.00e-101	363.00
IUUC-Oru-084242	Oryza rufipogon	28.59	1.00e-94	340.00
IUUC-Osa-085660	Oryza sativa	29.71	1.00e-102	367.00
IUUC-Ppa-095823	Physcomitrella patens	36.36	9.00e-103	367.00
IUUC-Pop-098900	Populus trichocarpa	33.47	1.00e-128	453.00
IUUC-Ppe-101763	Prunus persica	31.59	8.00e-75	274.00
IUUC-Sit-110507	Setaria italica	31.83	6.00e-67	248.00
IUUC-Sly-111401	Solanum lycopersicum	29.66	2.00e-64	239.00
IUUC-Stu-112879	Solanum tuberosum	31.86	1.00e-60	226.00
IUUC-Tca-121440	Theobroma cacao	31.87	5.00e-110	391.00
IUUC-Tae-124422	Triticum aestivum	29.31	4.00e-65	242.00
IUUC-Vvi-131537	Vitis vinifera	33.07	1.00e-67	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence