iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109073

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377628

Gene Name

SELMODRAFT_423775

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_423775	EFJ14238	EFJ14238

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-08	33.7	992	1021
E3 activity/RING/U-box	1.20e-23	83.6	342	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  vt+la  ++ ++l sGs D+ti+v+ 
   Q: 992  HTKCVTSLAIlPSkHRLYSGSLDKTIRVCK 1021
           9999*****9988799***********765 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+++++ dPv+l++G+ty+r++I++wl++g+ tcP+ rqpl +  l   n+ l+rli++w +e+
   Q: 342  PPKDFVCPITNQIFDDPVTLETGQTYERKAIKEWLSRGNVTCPMSRQPLIKVALpRTNYILKRLISDWKAES 413
           79***********************************************999999*************9875 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MASKKRSHNF AAARTPAQIE KIVLSTVGSY ILDQLLDSDR RAEHKKLCTE ALVQHSNNEG 60
GYVDYAEQAV LANLDWGIEA VEEAIRTPHE ETKSARLQHA EKMLQVCALL DVRSEIAGIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCAA AAAAACGTTC TCACAACTTT GCGGCGGCAC GAACACCAGC TCAAATCGAA 60
AAAATTGTCC TCTCCACCGT CGGGAGCTAT ATCTTGGATC AGTTGCTGGA CAGCGATCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2

Pfam

PF04564--U-box

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_423775

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence