iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109545

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377651

Gene Name

SELMODRAFT_426843

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_426843	EFJ10921	EFJ10921

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-11	42.5	1170	1199
E3 activity/RING/U-box	5.50e-25	87.9	453	524

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  vt+la+ s+ ++l s+s D t++vW 
   Q: 1170 HSKAVTSLALsSSsNRLYSASLDRTVRVWA 1199
           9999******9556***************7 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+++l+ dPv+l++G+ty+r++I++wl++g++tcP+trq l+++ l   n++l+rl+++w e +
   Q: 453  PPKDFVCPITNQLFDDPVTLETGQTYERTAIREWLERGNTTCPITRQLLKNRALpSTNYVLKRLVENWKEIH 524
           699*****************************************************************8766 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MTMLPLFDAS IENVLLSSVS RYALDALIDP SRRRRQREAE RRWILDRQQQ QQGQDREVRY 60
ADQAVLANLG WGIDALEEAI QTGNVETKIA RLDYAEKMLQ VCALLDRGSD TAGISNAYLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAATGC TTCCATTGTT TGACGCGAGC ATAGAGAACG TCCTCCTCTC TTCCGTGTCG 60
CGCTATGCCC TGGATGCCCT AATCGATCCA TCCCGGCGGC GGCGGCAGCG CGAGGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_426843

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002936	Amborella trichopoda	33.60	2.00e-143	503.00
IUUC-Bdi-014680	Brachypodium distachyon	34.98	6.00e-145	508.00
IUUC-Lpe-051224	Leersia perrieri	33.37	2.00e-120	426.00
IUUC-Oba-075721	Oryza barthii	25.67	1.00e-78	287.00
IUUC-Obr-076347	Oryza brachyantha	33.47	1.00e-135	477.00
IUUC-Ogl-077695	Oryza glaberrima	35.52	3.00e-121	429.00
IUUC-Ogu-078873	Oryza glumaepatula	35.67	9.00e-131	461.00
IUUC-Oin-079745	Oryza indica	36.23	8.00e-71	261.00
IUUC-Olo-081050	Oryza longistaminata	32.64	3.00e-70	259.00
IUUC-Ome-081604	Oryza meridionalis	34.60	5.00e-127	448.00
IUUC-Oni-082155	Oryza nivara	34.82	2.00e-122	433.00
IUUC-Opu-083775	Oryza punctata	32.13	1.00e-106	380.00
IUUC-Oru-084628	Oryza rufipogon	33.57	5.00e-120	425.00
IUUC-Osa-085493	Oryza sativa	25.67	2.00e-78	286.00
IUUC-Pop-099454	Populus trichocarpa	35.97	0.00e+00	822.00
IUUC-Sit-110152	Setaria italica	37.27	8.00e-158	550.00
IUUC-Sly-111208	Solanum lycopersicum	37.58	1.00e-173	603.00
IUUC-Stu-111946	Solanum tuberosum	35.68	2.00e-170	592.00
IUUC-Tur-126163	Triticum urartu	31.34	1.00e-101	363.00
IUUC-Vvi-131112	Vitis vinifera	37.21	0.00e+00	797.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence