iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110976

Ensembl Protein ID

Solyc06g065730.2.1

UniProt Accession

K4C7K2; K4C7K2_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g065730.2	Solyc06g065730.2.1	Solyc06g065730.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.10e-08	34.4	31	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  Cg +g+    l+ Ce C+ ++Hp+Cl ++ + +lp+s  w Cp+C 
   Q: 31   SCQACGGEGD----LLYCESCTYAYHPKCLLPPLKAPLPSS--WRCPECV 74
           6888888888....***************************..******7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTLMMNLIRS LSLDRKTLRE FSVLTRQKDE SCQACGGEGD LLYCESCTYA YHPKCLLPPL 60
KAPLPSSWRC PECVSPLNDI DKILDCEMRP TVADDSDASN MGSKHVFVKQ YLVKWKGLSY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCTGA TGATGAATTT GATAAGAAGT CTGAGCCTAG ACAGGAAAAC TTTGAGAGAA 60
TTTTCCGTCC TGACGCGGTA AATTCCCCTT GAATATTGCT TTTCTATGCT AATTCTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009057--Homeobox-like
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	42.35	0.00e+00	707.00
IUUC-Apl-004175	Anas platyrhynchos	43.16	0.00e+00	714.00
IUUC-Aca-004774	Anolis carolinensis	43.68	0.00e+00	726.00
IUUC-Aly-005645	Arabidopsis lyrata	46.36	3.00e-157	550.00
IUUC-Ath-007406	Arabidopsis thaliana	41.85	1.00e-160	561.00
IUUC-Ame-011098	Astyanax mexicanus	43.08	0.00e+00	689.00
IUUC-Bta-012868	Bos taurus	43.61	0.00e+00	697.00
IUUC-Bol-016073	Brassica oleracea	40.58	3.00e-159	556.00
IUUC-Bra-016724	Brassica rapa	40.58	3.00e-159	556.00
IUUC-Cel-018108	Caenorhabditis elegans	39.76	0.00e+00	693.00
IUUC-Cja-019018	Callithrix jacchus	43.52	0.00e+00	697.00
IUUC-Cfa-021055	Canis familiaris	43.52	0.00e+00	697.00
IUUC-Cpo-021523	Cavia porcellus	43.80	0.00e+00	699.00
IUUC-Csa-024136	Chlorocebus sabaeus	43.51	0.00e+00	695.00
IUUC-Cho-024361	Choloepus hoffmanni	45.09	6.00e-169	588.00
IUUC-Csv-025847	Ciona savignyi	40.90	0.00e+00	677.00
IUUC-Dre-027505	Danio rerio	42.53	0.00e+00	694.00
IUUC-Dno-029656	Dasypus novemcinctus	43.12	0.00e+00	709.00
IUUC-Dor-030167	Dipodomys ordii	43.24	0.00e+00	696.00
IUUC-Dme-032150	Drosophila melanogaster	40.47	0.00e+00	701.00
IUUC-Ete-032757	Echinops telfairi	43.88	3.00e-169	589.00
IUUC-Eca-034112	Equus caballus	43.12	0.00e+00	709.00
IUUC-Eeu-034777	Erinaceus europaeus	43.82	2.00e-94	340.00
IUUC-Fca-036043	Felis catus	43.52	0.00e+00	697.00
IUUC-Fal-037312	Ficedula albicollis	43.20	0.00e+00	715.00
IUUC-Gmo-038957	Gadus morhua	45.12	0.00e+00	640.00
IUUC-Gga-040216	Gallus gallus	43.20	0.00e+00	717.00
IUUC-Gac-042478	Gasterosteus aculeatus	42.07	0.00e+00	703.00
IUUC-Gma-043999	Glycine max	72.73	0.00e+00	1859.00
IUUC-Ggo-045538	Gorilla gorilla	43.52	0.00e+00	696.00
IUUC-Hsa-045916	Homo sapiens	43.52	0.00e+00	694.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	43.52	0.00e+00	694.00
IUUC-Lch-050343	Latimeria chalumnae	40.67	0.00e+00	695.00
IUUC-Loc-052383	Lepisosteus oculatus	42.84	0.00e+00	661.00
IUUC-Laf-053870	Loxodonta africana	43.61	0.00e+00	699.00
IUUC-Mcc-055773	Macaca mulatta	42.37	0.00e+00	707.00
IUUC-Mga-059633	Meleagris gallopavo	43.16	0.00e+00	715.00
IUUC-Mmr-061223	Microcebus murinus	42.99	0.00e+00	691.00
IUUC-Mdo-062971	Monodelphis domestica	43.59	0.00e+00	698.00
IUUC-Mmu-063920	Mus musculus	42.65	0.00e+00	685.00
IUUC-Mpu-065809	Mustela putorius furo	43.52	0.00e+00	696.00
IUUC-Mlu-067355	Myotis lucifugus	43.66	0.00e+00	691.00
IUUC-Nle-069842	Nomascus leucogenys	43.52	0.00e+00	691.00
IUUC-Opr-070960	Ochotona princeps	42.69	0.00e+00	663.00
IUUC-Ont-072418	Oreochromis niloticus	43.25	0.00e+00	701.00
IUUC-Oan-072885	Ornithorhynchus anatinus	43.04	3.00e-145	509.00
IUUC-Ocu-074438	Oryctolagus cuniculus	43.40	0.00e+00	689.00
IUUC-Ola-086880	Oryzias latipes	43.16	0.00e+00	710.00
IUUC-Oga-088374	Otolemur garnettii	43.67	0.00e+00	696.00
IUUC-Oar-089784	Ovis aries	43.33	0.00e+00	691.00
IUUC-Ptr-090799	Pan troglodytes	43.52	0.00e+00	694.00
IUUC-Pan-092441	Papio anubis	43.13	0.00e+00	710.00
IUUC-Psi-093007	Pelodiscus sinensis	40.48	0.00e+00	671.00
IUUC-Ppa-095213	Physcomitrella patens	60.50	0.00e+00	1210.00
IUUC-Pfo-097530	Poecilia formosa	43.31	0.00e+00	697.00
IUUC-Pab-098174	Pongo abelii	43.67	0.00e+00	670.00
IUUC-Pca-100829	Procavia capensis	46.83	0.00e+00	643.00
IUUC-Pva-103186	Pteropus vampyrus	42.26	0.00e+00	700.00
IUUC-Rno-104884	Rattus norvegicus	42.37	0.00e+00	684.00
IUUC-Sha-107233	Sarcophilus harrisii	43.88	0.00e+00	696.00
IUUC-Smo-108946	Selaginella moellendorffii	42.31	8.00e-171	594.00
IUUC-Ssc-115751	Sus scrofa	43.33	0.00e+00	692.00
IUUC-Tgu-117484	Taeniopygia guttata	43.20	0.00e+00	717.00
IUUC-Tru-118648	Takifugu rubripes	41.77	0.00e+00	726.00
IUUC-Tsy-119261	Tarsius syrichta	47.20	4.00e-143	502.00
IUUC-Tni-120764	Tetraodon nigroviridis	42.57	0.00e+00	698.00
IUUC-Ttr-128478	Tursiops truncatus	41.72	0.00e+00	686.00
IUUC-Vpa-130209	Vicugna pacos	54.86	1.00e-87	318.00
IUUC-Vvi-130849	Vitis vinifera	74.48	0.00e+00	1926.00
IUUC-Xtr-132668	Xenopus tropicalis	40.96	0.00e+00	677.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence