iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000002669.3	ENSXETT00000032387.3	ENSXETP00000032387.3
ENSXETG00000002669.3	ENSXETT00000005738.3	ENSXETP00000005738.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.40e-10	38.7	2	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC+++++ ++ ++eC++C++wfH  C+k + e +  + + + Cp+C+
   Q: 2    VYC-VCRQPYDVSRFMIECDICKDWFHSSCVKVE-EHQAADIDLYHCPNCE 50
           69*.******************************.999999999******6 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

PVYCVCRQPY DVSRFMIECD ICKDWFHSSC VKVEEHQAAD IDLYHCPNCE VLHGPSQLKK 60
RRNWHRHDYT EPDDGTKPVQ AGTRTFIQQL QARSFPSADD LLLKMNGSQL TQRYLEKQGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGAG CGGCTCCAGT CTACTGTGTG TGCCGGCAGC CGTACGATGT GAGCCGCTTT 60
ATGATCGAAT GTGACATCTG CAAGGACTGG TTCCACAGCA GGTGAGGAGA GTGGGGTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011675	Astyanax mexicanus	56.13	0.00e+00	749.00
IUUC-Cja-018757	Callithrix jacchus	67.32	0.00e+00	1121.00
IUUC-Csa-023888	Chlorocebus sabaeus	66.67	0.00e+00	1139.00
IUUC-Dre-027922	Danio rerio	66.32	0.00e+00	764.00
IUUC-Dno-030062	Dasypus novemcinctus	66.31	0.00e+00	1097.00
IUUC-Gga-040633	Gallus gallus	86.40	0.00e+00	687.00
IUUC-Gac-041447	Gasterosteus aculeatus	57.71	0.00e+00	781.00
IUUC-Hsa-046706	Homo sapiens	66.89	0.00e+00	1125.00
IUUC-Loc-052781	Lepisosteus oculatus	65.25	0.00e+00	896.00
IUUC-Mmr-061767	Microcebus murinus	65.68	0.00e+00	1097.00
IUUC-Mdo-062778	Monodelphis domestica	67.95	0.00e+00	1160.00
IUUC-Mmu-064343	Mus musculus	66.45	0.00e+00	1078.00
IUUC-Ola-087006	Oryzias latipes	61.11	0.00e+00	811.00
IUUC-Ptr-090549	Pan troglodytes	66.89	0.00e+00	1125.00
IUUC-Pan-091786	Papio anubis	66.49	0.00e+00	1137.00
IUUC-Smo-109024	Selaginella moellendorffii	36.53	4.00e-57	216.00
IUUC-Ssc-116137	Sus scrofa	66.59	0.00e+00	1088.00
IUUC-Tru-118331	Takifugu rubripes	60.00	0.00e+00	799.00
IUUC-Tni-119870	Tetraodon nigroviridis	77.73	0.00e+00	751.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence