iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016045

Ensembl Protein ID

Bo5g004640.1

UniProt Accession

A0A0D3C7J5; A0A0D3C7J5_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g004640	Bo5g004640.1	Bo5g004640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-13	52.2	2	68
E3 adaptor/Cullin RING/DCX/DWD	1.80e-24	86.3	262	292
UBD/Beta-Prp	4.40e-45	155.6	227	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e++ +Pvv++ sG  y+++ Ie ++++ gk cPvt++p t +d+v  +t + +  + +++ s
   Q: 2    NCAISGEVPVEPVVSKkSGLLYEKRLIETHISDFGK-CPVTGEPHTIDDIVAVKTGKIVKPKPLHTAS 68
           7***********************************.*************************999876 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t+++W 
   Q: 262  GHSKKVTSIKFvGDtDLVLTASSDKTVRIWG 292
           8***********6669**************7 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgdk 108
           ++++  +k+++atg+ d t  ++d  +g+ l++l gh+++vt++kf  d+++ +t+s+D+t+++w  s   ++ c htlk h+++v+++++++++++
   Q: 227  SMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGSSedgSYACRHTLKDHSAEVRAVTVHATNKY 323
           567778999********************************************************544477899*********************** PP
   S: 109  lvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
           +vs+s d+t   +d+++g cl + t++ ++   + +++hpdg +l +G++ ++v++Wd+k++  + ++ g ht+ ++s+sf++ng +l++ +ldg v
   Q: 324  FVSASLDSTWCFYDMSSGLCLAQvTDDSEKVDYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGG-HTGEITSVSFSENGYFLATSALDG-V 418
           *********************998999999999***********************************88.********************9998.8 PP
   S: 205  klwdlqtgecvrtlnghtdnvksvrfspnderl 237
           +lwdl++ +  rt++  ++n  sv+f+  + +l
   Q: 419  RLWDLRKLKNFRTFEFPNAN--SVEFDHSGSYL 449
           ******99999998876543..55555555555 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MNCAISGEVP VEPVVSKKSG LLYEKRLIET HISDFGKCPV TGEPHTIDDI VAVKTGKIVK 60
PKPLHTASIP GLLGTFQTEW DGLMLSNFSL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGCG CAAGTAAGAC TTCCCTTTCT CATTCTTGTC GATTTGCCAA TTTAGGGTTT 60
TACGCTGGGT CGTATCTGTT GGTGACAGTC TGGTTTGTTT CTCTGCGCAG TTTCCGGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	65.00	0.00e+00	703.00
IUUC-Aly-005586	Arabidopsis lyrata	92.15	0.00e+00	1006.00
IUUC-Ath-007693	Arabidopsis thaliana	91.20	0.00e+00	993.00
IUUC-Bgr-012283	Blumeria graminis	31.44	8.00e-50	191.00
IUUC-Bci-013901	Botrytis cinerea	35.07	4.00e-68	251.00
IUUC-Bra-017902	Brassica rapa	98.47	0.00e+00	1065.00
IUUC-Cne-026860	Cryptococcus neoformans	37.09	2.00e-93	335.00
IUUC-Ete-033035	Echinops telfairi	44.30	6.00e-55	207.00
IUUC-Ggr-039854	Gaeumannomyces graminis	33.33	2.00e-55	209.00
IUUC-Hvu-047442	Hordeum vulgare	70.83	5.00e-132	463.00
IUUC-Mpo-057419	Magnaporthe poae	32.89	6.00e-51	194.00
IUUC-Oba-075509	Oryza barthii	70.91	0.00e+00	775.00
IUUC-Ogl-077052	Oryza glaberrima	70.91	0.00e+00	775.00
IUUC-Ogu-078919	Oryza glumaepatula	71.10	0.00e+00	775.00
IUUC-Olo-080376	Oryza longistaminata	70.59	0.00e+00	722.00
IUUC-Ome-081973	Oryza meridionalis	70.59	0.00e+00	723.00
IUUC-Oni-082849	Oryza nivara	70.72	0.00e+00	772.00
IUUC-Opu-083243	Oryza punctata	71.29	0.00e+00	777.00
IUUC-Oru-084613	Oryza rufipogon	70.91	0.00e+00	774.00
IUUC-Osa-085407	Oryza sativa	70.72	0.00e+00	772.00
IUUC-Ppa-095924	Physcomitrella patens	67.12	0.00e+00	721.00
IUUC-Pgr-103304	Puccinia graminis	35.05	2.00e-77	283.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.03	4.00e-45	175.00
IUUC-Spo-108315	Schizosaccharomyces pombe	30.14	3.00e-38	152.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	33.46	5.00e-64	238.00
IUUC-Smo-109648	Selaginella moellendorffii	64.79	0.00e+00	699.00
IUUC-Tca-121807	Theobroma cacao	74.57	0.00e+00	827.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence