iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +   ++  +vlpC H +h +C+ +w       s + +CP+Cr
   Q: 775  CSICLTQYiknSK-IRVLPCFHEYHDKCIDRW------LSDNSTCPICR 816
           ******9976545.99****************......**********8 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MCCSHALLNV DGMTCLKVEN LAHHTSSYTL KHVFEDYGPL GDVYIPRNHL TEEHYGFAFI 60
HFYNKCDAND ALHSLNGFLL DGCKLKVQMV YNDDPHYAQP DCSSGRQYQY KEENHDLQSE 120

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Nucleotide Sequence
(Fasta)

GTCCAAGCCT CGTGGTCTCG TGTCAAATGT ACCGGAGAAA ACGTTCATAG CCGTTTCTTC 60
TTCTCTTACA GATCCATTAA AAACTGCTCA ACTCAGATGA TCCAGCCCTA TCAAGGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1
PF13639--zf-RING_2

SMART

SM00184--RING
SM00360--RRM

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0008270--F:zinc ion binding

KEGG

mmu:245492

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000590	Aegilops tauschii	39.47	6.00e-14	71.20
IUUC-Atr-002738	Amborella trichopoda	40.26	6.00e-13	70.10
IUUC-Hvu-047663	Hordeum vulgare	42.25	3.00e-13	70.90
IUUC-Lpe-051616	Leersia perrieri	42.65	8.00e-13	69.30
IUUC-Mtr-057698	Medicago truncatula	33.33	3.00e-13	68.90
IUUC-Obr-076746	Oryza brachyantha	42.65	1.00e-12	68.60
IUUC-Olo-080549	Oryza longistaminata	41.67	2.00e-13	68.90
IUUC-Ppa-095697	Physcomitrella patens	40.79	5.00e-15	76.60
IUUC-Smo-109212	Selaginella moellendorffii	39.13	5.00e-14	72.40
IUUC-Sly-111606	Solanum lycopersicum	34.85	1.00e-14	73.60
IUUC-Stu-112026	Solanum tuberosum	36.07	2.00e-13	68.60
IUUC-Tae-125363	Triticum aestivum	39.74	1.00e-13	72.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence