iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135414

Ensembl Protein ID

Zm00001d041708_T001

UniProt Accession

A0A1D6MXS1; A0A1D6MXS1_MAIZE

Genbank Protein ID

ONM33524.1

Protein Name

PHD finger family protein

Genbank Nucleotide ID

CM007649

Gene Name

ZEAMMB73_Zm00001d041708

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d041708	Zm00001d041708_T001	Zm00001d041708_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.00e-18	67.0	273	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek..slveCekCrewfHpaClkls..veeelpnsek..wiCpkCrs 53
           ++C++C + ++d++   +v+C+ C++w+H +C ++s   +++++ +++  ++C  Cr 
   Q: 273  NYCPICLKVYRDSEviPMVCCDVCEKWVHIECDGISeeKYQQFQADQNlqYTCAACRG 330
           79***********99999******************65333344444467******85 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAFHVACPIT CRRVCDCELG FGAAAARKGG GGGAAAAVWA GTAAVLEGFL VDPWLLRPAG 60
AVDEDAATVQ VEVPPLEPDP EDGEDEARRA AAQRGAAAAE DLARRFESGA YGSPEAGEDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCAGATT ACCGACGCGA CCACCCATCT GGGCTCTGGC CGCCTCGCCC CCCGTCGCTC 60
CCTTCCATGG CGTTTCACGT CGCGTGCCCC ATCACTTGGT AATCTCCCTC CCTCTGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001054	Aegilops tauschii	63.03	0.00e+00	811.00
IUUC-Aml-002367	Ailuropoda melanoleuca	33.82	6.00e-27	117.00
IUUC-Atr-003006	Amborella trichopoda	41.14	2.00e-149	522.00
IUUC-Apl-003478	Anas platyrhynchos	32.34	9.00e-29	123.00
IUUC-Aca-004718	Anolis carolinensis	32.52	1.00e-24	109.00
IUUC-Aly-006363	Arabidopsis lyrata	42.29	7.00e-163	566.00
IUUC-Ath-007307	Arabidopsis thaliana	42.48	7.00e-163	566.00
IUUC-Ame-010705	Astyanax mexicanus	31.93	6.00e-25	111.00
IUUC-Bta-013578	Bos taurus	34.80	2.00e-27	119.00
IUUC-Bdi-014882	Brachypodium distachyon	76.99	0.00e+00	993.00
IUUC-Bol-015791	Brassica oleracea	41.46	6.00e-152	530.00
IUUC-Bra-017422	Brassica rapa	40.38	4.00e-152	531.00
IUUC-Cel-018354	Caenorhabditis elegans	28.00	3.00e-14	75.50
IUUC-Cja-019138	Callithrix jacchus	34.31	3.00e-27	118.00
IUUC-Cfa-020020	Canis familiaris	33.82	7.00e-27	117.00
IUUC-Cpo-021459	Cavia porcellus	32.84	7.00e-29	124.00
IUUC-Csa-024216	Chlorocebus sabaeus	34.31	2.00e-27	118.00
IUUC-Cin-025585	Ciona intestinalis	28.30	4.00e-11	62.80
IUUC-Csv-026268	Ciona savignyi	31.19	2.00e-23	104.00
IUUC-Dre-027440	Danio rerio	32.90	5.00e-24	108.00
IUUC-Dno-029583	Dasypus novemcinctus	34.80	1.00e-27	120.00
IUUC-Dor-030903	Dipodomys ordii	34.31	5.00e-27	117.00
IUUC-Dme-031590	Drosophila melanogaster	32.62	9.00e-18	86.30
IUUC-Ete-032834	Echinops telfairi	32.67	9.00e-29	124.00
IUUC-Eca-034026	Equus caballus	34.80	4.00e-27	117.00
IUUC-Eeu-034687	Erinaceus europaeus	34.31	2.00e-27	119.00
IUUC-Fca-036311	Felis catus	33.82	6.00e-27	117.00
IUUC-Fal-037256	Ficedula albicollis	32.34	5.00e-29	125.00
IUUC-Gmo-038641	Gadus morhua	33.50	8.00e-26	114.00
IUUC-Gga-040828	Gallus gallus	32.34	9.00e-29	124.00
IUUC-Gac-042202	Gasterosteus aculeatus	32.66	7.00e-24	107.00
IUUC-Gma-043720	Glycine max	41.78	2.00e-150	526.00
IUUC-Ggo-044791	Gorilla gorilla	34.31	4.00e-27	117.00
IUUC-Hsa-046988	Homo sapiens	34.31	3.00e-27	118.00
IUUC-Hvu-047762	Hordeum vulgare	75.22	0.00e+00	742.00
IUUC-Itr-048907	Ictidomys tridecemlineatus	34.80	2.00e-27	119.00
IUUC-Lch-049704	Latimeria chalumnae	31.68	3.00e-28	122.00
IUUC-Lpe-051476	Leersia perrieri	77.67	0.00e+00	984.00
IUUC-Loc-052181	Lepisosteus oculatus	32.67	3.00e-29	125.00
IUUC-Laf-053703	Loxodonta africana	34.31	5.00e-27	117.00
IUUC-Mcc-054782	Macaca mulatta	34.31	3.00e-27	118.00
IUUC-Meu-056046	Macropus eugenii	33.17	7.00e-26	113.00
IUUC-Mtr-058482	Medicago truncatula	38.46	8.00e-132	464.00
IUUC-Mga-059943	Meleagris gallopavo	32.34	1.00e-28	124.00
IUUC-Mmr-061316	Microcebus murinus	34.80	1.00e-27	119.00
IUUC-Mdo-062648	Monodelphis domestica	33.33	4.00e-26	114.00
IUUC-Mmu-063579	Mus musculus	34.31	2.00e-27	119.00
IUUC-Mac-064935	Musa acuminata	48.55	0.00e+00	694.00
IUUC-Mpu-066710	Mustela putorius furo	34.31	3.00e-27	118.00
IUUC-Mlu-067559	Myotis lucifugus	34.31	2.00e-27	119.00
IUUC-Nle-070085	Nomascus leucogenys	34.31	7.00e-27	117.00
IUUC-Opr-071148	Ochotona princeps	35.29	7.00e-29	124.00
IUUC-Ont-071626	Oreochromis niloticus	33.67	1.00e-25	113.00
IUUC-Oan-073324	Ornithorhynchus anatinus	32.34	7.00e-28	120.00
IUUC-Ocu-074475	Oryctolagus cuniculus	34.80	1.00e-27	119.00
IUUC-Oba-075328	Oryza barthii	78.59	0.00e+00	907.00
IUUC-Obr-076458	Oryza brachyantha	79.74	0.00e+00	1037.00
IUUC-Ogl-077851	Oryza glaberrima	79.74	0.00e+00	1043.00
IUUC-Ogu-078706	Oryza glumaepatula	79.83	0.00e+00	1011.00
IUUC-Oin-079802	Oryza indica	76.96	3.00e-178	617.00
IUUC-Olo-080932	Oryza longistaminata	79.97	0.00e+00	1012.00
IUUC-Ome-081954	Oryza meridionalis	70.92	0.00e+00	874.00
IUUC-Oni-082043	Oryza nivara	79.97	0.00e+00	1012.00
IUUC-Opu-083679	Oryza punctata	80.61	0.00e+00	1012.00
IUUC-Oru-084257	Oryza rufipogon	74.67	0.00e+00	1041.00
IUUC-Osa-085421	Oryza sativa	79.74	0.00e+00	1013.00
IUUC-Ola-087176	Oryzias latipes	31.34	1.00e-23	107.00
IUUC-Oga-088140	Otolemur garnettii	34.31	3.00e-27	118.00
IUUC-Oar-089447	Ovis aries	34.80	2.00e-27	119.00
IUUC-Ptr-090902	Pan troglodytes	34.31	3.00e-27	118.00
IUUC-Pan-091930	Papio anubis	34.31	3.00e-27	118.00
IUUC-Psi-094059	Pelodiscus sinensis	32.34	6.00e-29	124.00
IUUC-Pma-094252	Petromyzon marinus	30.67	1.00e-19	92.40
IUUC-Ppa-095221	Physcomitrella patens	61.73	9.00e-97	347.00
IUUC-Pfo-096536	Poecilia formosa	31.37	5.00e-25	112.00
IUUC-Pab-098262	Pongo abelii	32.34	8.00e-29	124.00
IUUC-Pop-099620	Populus trichocarpa	43.36	1.00e-150	526.00
IUUC-Pca-100358	Procavia capensis	32.34	1.00e-28	124.00
IUUC-Ppe-101920	Prunus persica	43.63	9.00e-159	553.00
IUUC-Pva-102634	Pteropus vampyrus	34.31	8.00e-28	120.00
IUUC-Rno-105870	Rattus norvegicus	34.13	1.00e-27	119.00
IUUC-Sha-107174	Sarcophilus harrisii	32.34	6.00e-29	124.00
IUUC-Smo-109624	Selaginella moellendorffii	55.31	1.00e-88	320.00
IUUC-Sit-110552	Setaria italica	88.84	0.00e+00	1201.00
IUUC-Sly-111109	Solanum lycopersicum	55.04	3.00e-133	469.00
IUUC-Sar-113183	Sorex araneus	28.35	1.00e-14	77.00
IUUC-Ssc-115509	Sus scrofa	34.31	2.00e-27	119.00
IUUC-Tgu-117047	Taeniopygia guttata	32.34	4.00e-29	125.00
IUUC-Tru-118413	Takifugu rubripes	34.67	6.00e-26	114.00
IUUC-Tsy-118932	Tarsius syrichta	27.84	7.00e-15	78.20
IUUC-Tni-119794	Tetraodon nigroviridis	31.47	9.00e-26	112.00
IUUC-Tca-121624	Theobroma cacao	41.46	6.00e-166	577.00
IUUC-Tae-124647	Triticum aestivum	76.38	0.00e+00	732.00
IUUC-Tbe-127825	Tupaia belangeri	34.16	6.00e-27	117.00
IUUC-Ttr-128754	Tursiops truncatus	34.31	2.00e-27	119.00
IUUC-Vpa-130660	Vicugna pacos	33.71	1.00e-27	120.00
IUUC-Vvi-131236	Vitis vinifera	45.29	4.00e-145	508.00
IUUC-Xtr-132869	Xenopus tropicalis	32.34	2.00e-28	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence