iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114236

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G351900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g037390	Sb02g037390.1	Sb02g037390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.40e-39	135.8	48	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R++kel +l   + + +sa+p+ + +l++w  +i+Gp+++pYeggvF l+i fp+dYPfkPP v+f t+i+h+n++++Gkv l+ilk  + Wspa 
   Q: 48   RIQKELLDL---NASDCSAGPKGD-NLYHWLSTIIGPQGSPYEGGVFFLDIVFPPDYPFKPPMVTFKTRIYHCNIDSTGKVHLDILK--DGWSPAF 137
           899999999...56789*******.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           ++++vll+i+ ++++p p  pl  ++++++ ++r+++++++
   Q: 138  TISKVLLAIKDIISNPDPYTPLVMNISRQYLTDRAKHDEIA 178
           ***********************************999876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSSSFPNSR FPFGAGARAP GGSGGGGGSS VRPWGSSGGT SVSSSGKRIQ KELLDLNASD 60
CSAGPKGDNL YHWLSTIIGP QGSPYEGGVF FLDIVFPPDY PFKPPMVTFK TRIYHCNIDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCTCGT CCTCCTTCCC CAACTCCCGC TTCCCCTTCG GCGCCGGCGC CAGGGCCCCC 60
GGCGGAAGCG GCGGCGGAGG CGGGAGCAGC GTGCGGCCGT GGGGGTCGAG CGGCGGGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005634--C:nucleus
GO:0010099--P:regulation of photomorphogenesis

KEGG

sbi:SORBI_02g037390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000463	Aegilops tauschii	88.65	3.00e-74	272.00
IUUC-Aly-005950	Arabidopsis lyrata	65.97	1.00e-57	214.00
IUUC-Ath-006621	Arabidopsis thaliana	65.28	3.00e-57	213.00
IUUC-Bdi-014747	Brachypodium distachyon	89.36	6.00e-73	265.00
IUUC-Bol-015173	Brassica oleracea	62.50	7.00e-56	208.00
IUUC-Bra-017423	Brassica rapa	62.50	1.00e-55	207.00
IUUC-Cho-024986	Choloepus hoffmanni	66.94	2.00e-48	184.00
IUUC-Cin-025161	Ciona intestinalis	60.84	2.00e-46	177.00
IUUC-Dno-029130	Dasypus novemcinctus	67.20	1.00e-48	183.00
IUUC-Gma-043921	Glycine max	65.28	2.00e-54	204.00
IUUC-Itr-048624	Ictidomys tridecemlineatus	68.00	2.00e-48	183.00
IUUC-Lpe-051111	Leersia perrieri	82.48	5.00e-69	254.00
IUUC-Mtr-058214	Medicago truncatula	65.28	7.00e-57	211.00
IUUC-Mac-065206	Musa acuminata	75.54	1.00e-58	217.00
IUUC-Oan-073704	Ornithorhynchus anatinus	67.20	1.00e-48	183.00
IUUC-Oba-075804	Oryza barthii	84.21	3.00e-67	248.00
IUUC-Obr-076634	Oryza brachyantha	66.06	2.00e-59	220.00
IUUC-Ogl-077145	Oryza glaberrima	86.52	1.00e-71	261.00
IUUC-Oin-080066	Oryza indica	73.05	8.00e-68	248.00
IUUC-Opu-083227	Oryza punctata	85.40	2.00e-70	259.00
IUUC-Osa-086202	Oryza sativa	85.82	5.00e-71	259.00
IUUC-Pma-094642	Petromyzon marinus	65.87	2.00e-48	182.00
IUUC-Pop-099024	Populus trichocarpa	70.14	4.00e-60	222.00
IUUC-Ppe-101314	Prunus persica	64.58	2.00e-55	207.00
IUUC-Smo-108957	Selaginella moellendorffii	59.12	9.00e-53	198.00
IUUC-Sit-109845	Setaria italica	95.74	2.00e-79	286.00
IUUC-Sly-111200	Solanum lycopersicum	65.28	1.00e-56	211.00
IUUC-Tca-121777	Theobroma cacao	69.66	7.00e-59	219.00
IUUC-Tae-123189	Triticum aestivum	88.32	5.00e-73	268.00
IUUC-Vpa-130232	Vicugna pacos	66.93	9.00e-50	188.00
IUUC-Vvi-131190	Vitis vinifera	70.83	1.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence