iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109355

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD40 repeat protein

Genbank Nucleotide ID

GL377576

Gene Name

SELMODRAFT_450421

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_450421	EFJ30103	EFJ30103

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-17	63.7	207	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H++ v++l++     +++v+++dD +++vWDlr
   Q: 207  HAGQVRDLDYnpkRQHTIVTSGDDSKVRVWDLR 239
           99********9653278**************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MQGSQNTYGV KYQARCIAAV VADTQRTRFL VGTLSLREEN EIHLLQIGDK TGALAFDGLY 60
THPSEIWGLS ACPFDVSILS TVYASAGEFG AAIWKLPERA RGAANTPLQK LASLDGHTQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGATGCA AGGCTCGCAG AACACCTATG GCGTCAAGTA CCAGGTGCCA TTTGTTTCTT 60
CCGCTGGATC GATCGCAGAT CTGACTCTTG ACAATGCGGA TGATCATTTT TGTTCTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_450421

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003028	Amborella trichopoda	49.12	5.00e-95	340.00
IUUC-Apl-004211	Anas platyrhynchos	31.19	1.00e-48	186.00
IUUC-Aca-004893	Anolis carolinensis	32.35	6.00e-52	197.00
IUUC-Aly-005975	Arabidopsis lyrata	49.71	1.00e-98	352.00
IUUC-Ath-007527	Arabidopsis thaliana	49.43	5.00e-99	353.00
IUUC-Ame-010619	Astyanax mexicanus	33.95	5.00e-56	210.00
IUUC-Bta-013035	Bos taurus	33.16	1.00e-54	206.00
IUUC-Bdi-014619	Brachypodium distachyon	49.13	4.00e-95	340.00
IUUC-Bol-016581	Brassica oleracea	48.85	3.00e-97	347.00
IUUC-Bra-017885	Brassica rapa	48.55	9.00e-96	342.00
IUUC-Cel-018344	Caenorhabditis elegans	28.65	7.00e-38	150.00
IUUC-Cja-018975	Callithrix jacchus	31.42	3.00e-53	201.00
IUUC-Cfa-020214	Canis familiaris	32.89	5.00e-50	190.00
IUUC-Cpo-021363	Cavia porcellus	33.16	1.00e-49	189.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	32.66	3.00e-46	177.00
IUUC-Csa-023240	Chlorocebus sabaeus	32.89	8.00e-51	193.00
IUUC-Cin-025678	Ciona intestinalis	31.73	3.00e-46	178.00
IUUC-Csv-026022	Ciona savignyi	31.72	2.00e-44	172.00
IUUC-Dre-027817	Danio rerio	33.42	4.00e-59	221.00
IUUC-Dno-030097	Dasypus novemcinctus	32.62	6.00e-51	193.00
IUUC-Ete-032575	Echinops telfairi	27.49	1.00e-28	119.00
IUUC-Eca-034323	Equus caballus	33.58	2.00e-37	148.00
IUUC-Fca-035709	Felis catus	34.02	6.00e-42	163.00
IUUC-Fal-036989	Ficedula albicollis	33.16	2.00e-53	202.00
IUUC-Gmo-038623	Gadus morhua	32.19	8.00e-50	189.00
IUUC-Gga-040157	Gallus gallus	33.16	2.00e-54	205.00
IUUC-Gac-041368	Gasterosteus aculeatus	26.27	2.00e-21	95.50
IUUC-Gma-044196	Glycine max	46.67	1.00e-94	338.00
IUUC-Ggo-044513	Gorilla gorilla	31.33	1.00e-47	183.00
IUUC-Hsa-046844	Homo sapiens	31.42	2.00e-48	186.00
IUUC-Hvu-047435	Hordeum vulgare	49.13	1.00e-94	339.00
IUUC-Lch-049696	Latimeria chalumnae	31.83	3.00e-53	201.00
IUUC-Loc-052440	Lepisosteus oculatus	32.01	5.00e-54	204.00
IUUC-Laf-054088	Loxodonta africana	31.90	4.00e-50	191.00
IUUC-Mcc-055575	Macaca mulatta	30.83	4.00e-46	177.00
IUUC-Meu-056807	Macropus eugenii	36.00	2.00e-34	139.00
IUUC-Mga-059336	Meleagris gallopavo	32.61	1.00e-50	192.00
IUUC-Mmr-061706	Microcebus murinus	32.35	7.00e-53	200.00
IUUC-Mdo-062736	Monodelphis domestica	32.62	6.00e-52	197.00
IUUC-Mac-065342	Musa acuminata	50.00	1.00e-98	352.00
IUUC-Mpu-066514	Mustela putorius furo	32.89	2.00e-54	205.00
IUUC-Nle-069307	Nomascus leucogenys	29.75	2.00e-42	166.00
IUUC-Ont-072532	Oreochromis niloticus	33.95	2.00e-53	202.00
IUUC-Obr-076488	Oryza brachyantha	46.27	1.00e-82	299.00
IUUC-Ogl-077928	Oryza glaberrima	47.27	2.00e-83	301.00
IUUC-Oin-079848	Oryza indica	46.77	4.00e-82	297.00
IUUC-Osa-086152	Oryza sativa	47.10	1.00e-82	299.00
IUUC-Ola-086694	Oryzias latipes	32.60	3.00e-53	201.00
IUUC-Olu-087749	Ostreococcus lucimarinus	35.29	5.00e-24	103.00
IUUC-Oar-089621	Ovis aries	27.53	1.00e-32	132.00
IUUC-Ptr-091053	Pan troglodytes	32.10	6.00e-47	180.00
IUUC-Pan-091918	Papio anubis	32.89	9.00e-51	193.00
IUUC-Psi-093545	Pelodiscus sinensis	32.98	7.00e-52	196.00
IUUC-Pma-094439	Petromyzon marinus	32.21	3.00e-51	194.00
IUUC-Pfo-096127	Poecilia formosa	34.48	2.00e-55	208.00
IUUC-Pab-097916	Pongo abelii	29.88	2.00e-45	175.00
IUUC-Pop-098864	Populus trichocarpa	47.32	7.00e-98	349.00
IUUC-Ppe-101796	Prunus persica	48.17	1.00e-100	358.00
IUUC-Pva-103228	Pteropus vampyrus	31.42	2.00e-48	186.00
IUUC-Rno-104877	Rattus norvegicus	33.33	5.00e-52	197.00
IUUC-Sha-106940	Sarcophilus harrisii	33.51	3.00e-54	204.00
IUUC-Sly-111871	Solanum lycopersicum	50.00	4.00e-101	360.00
IUUC-Stu-112128	Solanum tuberosum	49.72	1.00e-99	355.00
IUUC-Sar-113084	Sorex araneus	32.06	2.00e-17	82.40
IUUC-Sbi-114122	Sorghum bicolor	47.32	5.00e-92	330.00
IUUC-Ssc-115385	Sus scrofa	33.33	8.00e-51	193.00
IUUC-Tgu-117090	Taeniopygia guttata	32.07	5.00e-49	187.00
IUUC-Tru-118548	Takifugu rubripes	30.79	2.00e-52	198.00
IUUC-Tsy-119435	Tarsius syrichta	30.42	8.00e-46	177.00
IUUC-Tni-120311	Tetraodon nigroviridis	29.63	4.00e-37	147.00
IUUC-Tca-121141	Theobroma cacao	47.89	1.00e-96	345.00
IUUC-Tae-122717	Triticum aestivum	48.45	1.00e-94	338.00
IUUC-Tbe-127623	Tupaia belangeri	24.18	2.00e-17	82.40
IUUC-Ttr-128706	Tursiops truncatus	33.21	3.00e-31	128.00
IUUC-Vvi-130871	Vitis vinifera	47.89	5.00e-96	343.00
IUUC-Xtr-131950	Xenopus tropicalis	33.42	2.00e-57	214.00
IUUC-Xma-133364	Xiphophorus maculatus	33.95	1.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence