iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109671

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein COP1L2-1

Genbank Nucleotide ID

GL377576

Gene Name

COP1L2-1; SELMODRAFT_451298

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_451298	EFJ30221	EFJ30221

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-26	90.4	384	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWD 29
           H+ ++++++f    +  +lvsG+dDg++k+W+
   Q: 384  HERRIWSVDFspmeP-SRLVSGGDDGKVKLWS 414
           999*******95543.78*************8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MPKGETATIA DDSDPGKSKS CQEDPSLAPP PRDPPHPSPP LPAVALADLE KDLSCPVCFQ 60
TLRDPFLTAC GHSFCYSCVS THLNGRSSCP CCSSYLTTKL MYPNVLLGKV VRELQTLKSL 120

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Nucleotide Sequence
(Fasta)

GTTTGTGAAA TTCCTGCGCC GCCTCGACGA TCGAATGCCG AAGGGTGAAA CCGCGACGAT 60
CGCCGATGAT AGCGATCCAG GGAAGAGCAA GAGCTGCCAG GAAGATCCTT CTCTTGCTCC 120

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Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_451298

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence