iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109511

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein COP1L2-2

Genbank Nucleotide ID

GL377588

Gene Name

COP1L2-2; SELMODRAFT_451299

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_451299	EFJ24914	EFJ24914

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-27	94.1	413	443
E3 activity/RING/U-box	6.80e-06	26.8	51	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWD 29
           H+ ++++++f    +  +lvsG+dDg++k+W+
   Q: 413  HERRIWSVDFspmeP-SRLVSGGDDGKVKLWS 443
           999*******95543.78*************8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrl 64
           +++ Cp+ ++  rdP  +++G+++  s++  +l+  ++ cP +++ lt + + Pn  l ++
   Q: 51   KDLSCPVCFQTLRDPFLTACGHSFCYSCVSTHLNGRNS-CPCCSSYLTTKLMYPNVLLGKV 110
           6789****************************988887.**********999***988555 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MPKGETATIA DDSDPGKSKS CQEDPSLAPP PRDPPHPSPP LPAVALADLE KDLSCPVCFQ 60
TLRDPFLTAC GHSFCYSCVS THLNGRNSCP CCSSYLTTKL MYPNVLLGKV VRELQTLKSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAAGG GTGAAACCGC GACGATCGCC GATGATAGCG ATCCAGGGAA GAGCAAGAGC 60
TGCCAGGAAG ATCCTTCTCT TGCTCCTCCT CCTCGGGATC CTCCTCATCC ATCGCCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_451299

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence