iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109543

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB4

Genbank Nucleotide ID

GL377613

Gene Name

SELMODRAFT_51240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_51240	EFJ17539	EFJ17539

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-31	109.4	96	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++f+Cp+slelM dPv+++sG+ty+r++I+ wl++g++ cP+t++pl++ +l+Pn+t+++li +wc++n++
   Q: 96   QIPADFRCPLSLELMYDPVIVASGQTYERAYIQHWLDQGNTRCPKTGKPLAHINLIPNYTVKALIASWCQTNDV 169
           69*********************************************************************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

EQIRQEIEAL LCDHREGRKA SREKLDKLAG CLGITTKEQI SEELNALEKD RGEAGRNKDK 60
LEEEFIDQVI SLFMQLAEDN FDDGDVKGET QSQEVQIPAD FRCPLSLELM YDPVIVASGQ 120

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Nucleotide Sequence
(Fasta)

GAACAGATAA GACAAGAGAT CGAGGCGCTG CTGTGCGATC ACAGGGAAGG CAGGAAGGCC 60
AGTCGTGAGA AGCTGGATAA GCTAGCTGGG TGCCTGGGAA TCACCACCAA GGAACAGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_51240

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence