iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109352

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377574

Gene Name

SELMODRAFT_66275

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_66275	EFJ31191	EFJ31191

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-20	71.6	60	99
UBD/Beta-Prp	2.40e-45	155.7	55	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           +Htd +++la  +d  l+ s+s+D ++kvW++++ ++l+s
   Q: 60   QHTDAISSLASsHDgSLVFSSSWDRSVKVWRVSDLRCLQS 99
           5********988777999*******************996 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.....dls.tgkcvhtlk....gh 93
           ++l  +h++ i++++ s d+sl++++s+d+++kvw+v++  +l+s+  h+++++a+  sp+g +l tgs D +i+vw     d + ++  + tl      +
   Q: 55   TCLWLQHTDAISSLASSHDGSLVFSSSWDRSVKVWRVSDLRCLQSFRAHDDAINALVASPEG-FLYTGSADSMIRVWkkggsDRKkKFALLATLFhetlSK 154
           5667789******************************************************9.**************887663334444444444331133 PP
   S: 94   edsvlslsfsp...sgdklvsGshdrtirvwdletgqclee...............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.....ktgkl 171
           + s  s+++++    g++l +G +d+ti vw+ +   ++ +                l+gh+g+v c+   +   ll sGs+D tvr+W++        ++
   Q: 155  SVSNGSTAVNAlvlGGEFLYAGLSDSTIAVWEKSLAGVVLDdrdrdhddpymscveRLRGHRGAVLCLGRAG--GLLCSGSADATVRIWSIefgglGGHCC 253
           334445777777756699*************99988888888************999********9998877..*****************5555555688 PP
   S: 172  lrtltgghtdsvysls...............fdsng.............kelvsgsldgtvklwd 208
           l  l+g ht++++sl                f  ++             +++ sg+ld++++ w 
   Q: 254  LGVLKG-HTGPIKSLVvvamdpalpreknddFYNDSaegdhgegeeeraFCIYSGGLDRQIRAWR 317
           999998.*********9887887776666664444489999999********************7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

ALVLSAHQDN KIRVWKTNSN RSFTMKLLAT LPRPRDVARS CMFPARYVRV RRHKTCLWLQ 60
HTDAISSLAS SHDGSLVFSS SWDRSVKVWR VSDLRCLQSF RAHDDAINAL VASPEGFLYT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTAGTCC TCAGCGCTCA CCAGGACAAC AAGATCCGCG TCTGGAAGAC AGTCGAGCTT 60
CTCAAGATCA ACGAATTCGA CTCCATCGCC AAGAACAGCA ACAGATCATT CACGATGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_66275

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence