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Tag Content
iUUCD ID IUUC-Gga-041268
Ensembl Protein ID ENSGALP00000007958.3
UniProt Accession Q5ZJU4; URM1_CHICK
Genbank Protein ID CAG31999.1
Protein Name Ubiquitin-related modifier 1
Genbank Nucleotide ID AJ720340
Gene Name URM1; RCJMB04_15k18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000004971.3 ENSGALT00000007972.3 ENSGALP00000007958.3
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 39.39 2.00e-16 78.20 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Gallus gallus
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MAAPVSLQVE FGGGAELLFD GVKKHQVTLP SQPEPWDIRN LLKWIKQNLL KERPELFMQG 60
ESVRPGILVL INDADWELMG ELDYKLQDQD NVLFISTLHG G 101
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Protein Fasta Sequence


>IUUC-Gga-041268|ULD,UBQ_Other|Gallus gallus
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Nucleotide Sequence
(Fasta)
GCGCCTTCCC TTCCCTTCCC TCTCGCCGCC GCCAAGATGG CGGCGCCCGT GTCGCTGCAG 60
GTGGAGTTCG GGTGAGCGAG GGCGGCGGCG GGAACTGGGG CCAGGGCTGG GCGGAGGGCA 120
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Nucleotide Fasta Sequence


>IUUC-Gga-041268|ULD,UBQ_Other|Gallus gallus
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005737--C:cytoplasm
GO:0070062--C:extracellular exosome
GO:0016783--F:sulfurtransferase activity
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
KEGG gga:417221
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 86.14 8.00e-49 184.00
IUUC-Atr-003089 Amborella trichopoda 58.59 4.00e-31 125.00
IUUC-Apl-003382 Anas platyrhynchos 97.80 4.00e-48 181.00
IUUC-Aca-004981 Anolis carolinensis 88.12 3.00e-50 189.00
IUUC-Aly-005517 Arabidopsis lyrata 54.35 5.00e-28 115.00
IUUC-Ath-006718 Arabidopsis thaliana 54.76 1.00e-24 103.00
IUUC-Ago-007917 Ashbya gossypii 43.43 3.00e-20 89.40
IUUC-Acl-008054 Aspergillus clavatus 66.00 3.00e-15 72.40
IUUC-Afl-008704 Aspergillus flavus 55.06 2.00e-21 92.80
IUUC-Aor-009890 Aspergillus oryzae 55.45 2.00e-25 107.00
IUUC-Bta-012448 Bos taurus 86.14 2.00e-48 182.00
IUUC-Bci-013865 Botrytis cinerea 46.08 6.00e-22 95.10
IUUC-Bdi-014980 Brachypodium distachyon 67.19 2.00e-23 100.00
IUUC-Bol-016055 Brassica oleracea 51.25 2.00e-23 99.80
IUUC-Bra-016845 Brassica rapa 51.25 2.00e-23 99.80
IUUC-Cel-018485 Caenorhabditis elegans 32.04 3.00e-12 62.80
IUUC-Cja-019587 Callithrix jacchus 88.12 4.00e-49 185.00
IUUC-Cfa-020653 Canis familiaris 85.15 3.00e-48 182.00
IUUC-Cpo-021622 Cavia porcellus 88.12 4.00e-49 185.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 52.04 3.00e-25 105.00
IUUC-Csa-023756 Chlorocebus sabaeus 86.08 3.00e-36 143.00
IUUC-Cgl-026518 Colletotrichum gloeosporioides 47.52 1.00e-22 97.40
IUUC-Cne-026953 Cryptococcus neoformans 56.31 2.00e-29 120.00
IUUC-Cme-027314 Cyanidioschyzon merolae 40.82 2.00e-18 83.60
IUUC-Dre-027884 Danio rerio 79.21 3.00e-45 172.00
IUUC-Dno-029262 Dasypus novemcinctus 83.75 5.00e-36 143.00
IUUC-Dor-030601 Dipodomys ordii 58.42 7.00e-25 104.00
IUUC-Dme-031893 Drosophila melanogaster 61.76 5.00e-32 128.00
IUUC-Ete-032773 Echinops telfairi 83.17 2.00e-44 169.00
IUUC-Eca-034187 Equus caballus 87.13 6.00e-49 184.00
IUUC-Eeu-034808 Erinaceus europaeus 83.17 1.00e-47 180.00
IUUC-Fca-036107 Felis catus 86.14 4.00e-49 185.00
IUUC-Fal-036607 Ficedula albicollis 96.70 9.00e-48 180.00
IUUC-Fox-037698 Fusarium oxysporum 48.08 2.00e-23 100.00
IUUC-Gmo-039492 Gadus morhua 79.21 5.00e-45 171.00
IUUC-Ggr-039965 Gaeumannomyces graminis 48.08 6.00e-21 92.80
IUUC-Gac-042111 Gasterosteus aculeatus 80.20 3.00e-46 175.00
IUUC-Gma-043240 Glycine max 52.38 1.00e-22 97.40
IUUC-Ggo-045176 Gorilla gorilla 84.81 1.00e-28 118.00
IUUC-Hsa-046077 Homo sapiens 86.14 2.00e-41 159.00
IUUC-Itr-048111 Ictidomys tridecemlineatus 89.89 3.00e-36 142.00
IUUC-Kpa-049157 Komagataella pastoris 45.45 2.00e-19 86.70
IUUC-Lch-049889 Latimeria chalumnae 83.17 2.00e-47 179.00
IUUC-Lpe-050783 Leersia perrieri 55.95 4.00e-22 95.50
IUUC-Loc-052400 Lepisosteus oculatus 81.19 4.00e-46 175.00
IUUC-Lma-053259 Leptosphaeria maculans 45.54 2.00e-21 93.60
IUUC-Laf-053596 Loxodonta africana 85.44 4.00e-47 178.00
IUUC-Mcc-054845 Macaca mulatta 82.65 5.00e-43 164.00
IUUC-Meu-055968 Macropus eugenii 90.10 3.00e-50 189.00
IUUC-Mor-057126 Magnaporthe oryzae 47.12 4.00e-20 89.70
IUUC-Mpo-057311 Magnaporthe poae 50.50 2.00e-22 97.80
IUUC-Mtr-058266 Medicago truncatula 50.00 3.00e-22 95.90
IUUC-Mla-058847 Melampsora laricipopulina 41.75 2.00e-13 67.00
IUUC-Mga-059468 Meleagris gallopavo 98.90 1.00e-48 183.00
IUUC-Mvi-060235 Microbotryum violaceum 36.42 4.00e-20 90.10
IUUC-Mdo-061948 Monodelphis domestica 88.12 1.00e-49 186.00
IUUC-Mmu-063946 Mus musculus 85.15 6.00e-48 181.00
IUUC-Mac-064812 Musa acuminata 57.83 5.00e-25 105.00
IUUC-Mpu-066763 Mustela putorius furo 85.15 2.00e-47 179.00
IUUC-Mlu-066970 Myotis lucifugus 87.34 8.00e-37 144.00
IUUC-Ncr-068824 Neurospora crassa 46.53 6.00e-21 92.00
IUUC-Nle-069849 Nomascus leucogenys 84.81 9.00e-36 142.00
IUUC-Opr-070227 Ochotona princeps 88.12 4.00e-49 185.00
IUUC-Ont-072530 Oreochromis niloticus 81.19 6.00e-46 174.00
IUUC-Oan-073191 Ornithorhynchus anatinus 78.35 2.00e-41 159.00
IUUC-Ocu-074460 Oryctolagus cuniculus 86.73 2.00e-47 179.00
IUUC-Oba-075499 Oryza barthii 58.33 2.00e-22 98.20
IUUC-Obr-076896 Oryza brachyantha 64.06 5.00e-22 97.40
IUUC-Ogl-077834 Oryza glaberrima 58.33 3.00e-23 99.00
IUUC-Ogu-078622 Oryza glumaepatula 58.33 3.00e-23 99.00
IUUC-Oin-079358 Oryza indica 58.33 1.00e-22 99.00
IUUC-Olo-081035 Oryza longistaminata 54.55 2.00e-24 104.00
IUUC-Oni-082425 Oryza nivara 58.33 3.00e-23 99.00
IUUC-Opu-083461 Oryza punctata 56.63 5.00e-22 96.70
IUUC-Oru-084875 Oryza rufipogon 59.15 1.00e-20 90.10
IUUC-Oga-089128 Otolemur garnettii 87.13 7.00e-49 184.00
IUUC-Oar-089896 Ovis aries 86.14 2.00e-48 182.00
IUUC-Ptr-091618 Pan troglodytes 84.81 1.00e-28 118.00
IUUC-Pan-092238 Papio anubis 86.08 3.00e-36 143.00
IUUC-Psi-093879 Pelodiscus sinensis 91.09 2.00e-51 192.00
IUUC-Pma-094484 Petromyzon marinus 77.23 6.00e-34 134.00
IUUC-Ppa-095801 Physcomitrella patens 58.02 7.00e-23 97.80
IUUC-Pfo-097192 Poecilia formosa 80.20 6.00e-46 174.00
IUUC-Pab-098203 Pongo abelii 86.14 3.00e-41 159.00
IUUC-Pop-099614 Populus trichocarpa 53.57 4.00e-23 99.00
IUUC-Pca-100507 Procavia capensis 86.08 1.00e-36 143.00
IUUC-Ppe-101174 Prunus persica 57.58 1.00e-29 120.00
IUUC-Pva-102735 Pteropus vampyrus 86.14 3.00e-45 172.00
IUUC-Pgr-103510 Puccinia graminis 40.78 5.00e-13 66.20
IUUC-Ptt-103918 Puccinia triticina 37.86 8.00e-12 62.00
IUUC-Pte-104173 Pyrenophora teres 45.63 5.00e-23 98.60
IUUC-Pyt-104806 Pyrenophora triticirepentis 45.63 5.00e-23 98.60
IUUC-Rno-105820 Rattus norvegicus 86.14 2.00e-48 182.00
IUUC-Sce-106366 Saccharomyces cerevisiae 39.39 6.00e-17 78.20
IUUC-Sja-107727 Schizosaccharomyces japonicus 41.67 2.00e-17 80.10
IUUC-Spo-108074 Schizosaccharomyces pombe 39.80 2.00e-10 56.20
IUUC-Smo-108944 Selaginella moellendorffii 60.67 2.00e-26 109.00
IUUC-Sit-110277 Setaria italica 54.76 5.00e-23 98.60
IUUC-Sly-111505 Solanum lycopersicum 54.76 8.00e-25 104.00
IUUC-Stu-112076 Solanum tuberosum 55.95 3.00e-25 105.00
IUUC-Sbi-114274 Sorghum bicolor 57.14 4.00e-23 99.00
IUUC-Sre-114953 Sporisorium reilianum 57.84 2.00e-27 113.00
IUUC-Ssc-115418 Sus scrofa 86.14 1.00e-48 183.00
IUUC-Tgu-117311 Taeniopygia guttata 95.60 2.00e-47 179.00
IUUC-Tru-118598 Takifugu rubripes 83.15 1.00e-40 156.00
IUUC-Tni-120109 Tetraodon nigroviridis 78.43 4.00e-43 165.00
IUUC-Tca-120942 Theobroma cacao 57.83 1.00e-24 103.00
IUUC-Tre-122099 Trichoderma reesei 48.39 4.00e-16 75.50
IUUC-Tvi-122285 Trichoderma virens 51.92 8.00e-21 91.70
IUUC-Tae-125193 Triticum aestivum 65.62 2.00e-22 96.30
IUUC-Tur-126677 Triticum urartu 55.26 8.00e-20 88.20
IUUC-Tme-127120 Tuber melanosporum 49.04 1.00e-24 104.00
IUUC-Tbe-128050 Tupaia belangeri 64.36 5.00e-31 125.00
IUUC-Ttr-129019 Tursiops truncatus 85.15 5.00e-46 174.00
IUUC-Uma-129483 Ustilago maydis 56.86 1.00e-25 107.00
IUUC-Vda-129690 Verticillium dahliae 41.07 6.00e-17 78.60
IUUC-Vvi-131174 Vitis vinifera 55.42 6.00e-24 101.00
IUUC-Xma-133862 Xiphophorus maculatus 80.20 6.00e-46 174.00
IUUC-Yli-134398 Yarrowia lipolytica 46.46 3.00e-19 86.30
IUUC-Zma-134964 Zea mays 56.79 1.00e-22 97.40
Created Date 25-Jun-2017

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